CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026293_P001	Maize	mitochondrion	95.89	95.33
Zm00001d002326_P003	Maize	mitochondrion	96.28	94.98
TraesCS2B01G440400.1	Wheat	golgi	87.67	87.67
TraesCS2A01G421400.1	Wheat	mitochondrion	86.89	86.89
HORVU2Hr1G098880.1	Barley	mitochondrion	86.69	86.69
Os04t0614600-01	Rice	mitochondrion	86.89	86.05
TraesCS2D01G418400.2	Wheat	mitochondrion	85.91	85.91
GSMUA_Achr5P00340_001	Banana	mitochondrion	80.04	80.99
EES14702	Sorghum	mitochondrion	79.26	79.57
CDY58748	Canola	mitochondrion	74.56	76.51
Bra023845.1-P	Field mustard	mitochondrion	74.36	75.85
CDY39506	Canola	mitochondrion	74.56	75.3
KRH24110	Soybean	mitochondrion	75.34	75.05
CDY37389	Canola	mitochondrion	73.39	75.0
Bra031332.1-P	Field mustard	mitochondrion	73.19	74.8
CDY10619	Canola	mitochondrion	73.19	74.8
PGSC0003DMT400030683	Potato	mitochondrion	74.95	74.37
Solyc07g043310.2.1	Tomato	nucleus	74.76	74.17
VIT_03s0017g01760.t01	Wine grape	mitochondrion	75.73	73.43
CDY10622	Canola	golgi	67.32	72.88
PGSC0003DMT400064961	Potato	cytosol	65.17	72.71
Solyc08g014610.2.1	Tomato	cytosol	64.58	72.05
Solyc12g006470.1.1	Tomato	extracellular, nucleus	64.58	72.05
KRH29085	Soybean	cytosol	74.56	71.89
AT3G22200.2	Thale cress	mitochondrion	71.62	71.34
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	68.49	70.99
Solyc12g006450.1.1	Tomato	plastid	71.43	70.74
PGSC0003DMT400062372	Potato	plastid	71.23	70.54
Bra031335.1-P	Field mustard	mitochondrion	68.3	69.52
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	41.49	69.28
Bra031334.1-P	Field mustard	cytosol	23.29	56.4
CDY10621	Canola	extracellular, plastid	25.44	55.08
KXG40078	Sorghum	mitochondrion	22.9	24.43
EER91172	Sorghum	mitochondrion	22.31	24.31
EER94889	Sorghum	mitochondrion	22.11	24.3
EES19688	Sorghum	mitochondrion	21.72	23.17
EES17651	Sorghum	plastid	20.74	22.75
KXG22248	Sorghum	plastid	19.77	21.35

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	EntrezGene:8072343	InterPro:Aminotrans_3	UniProt:C5YG05
EnsemblPlants:EES11419	ProteinID:EES11419	ProteinID:EES11419.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3006G214200	SUPFAM:SSF53383	unigene:Sbi.6908	UniParc:UPI0001A86F34	RefSeq:XP_002447091.1

Description

hypothetical protein

Coordinates

chr6:+:56248903..56254471

Molecular Weight (calculated)

55804.9 Da

IEP (calculated)

7.704

GRAVY (calculated)

-0.111

Length

511 amino acids

Sequence
(BLAST)

001: MIARRLLRSN APAQASSLLK HVTGTASLQG HADSLLDASV RHFSSAPSAQ SASTEENGFK GHGMLAPFTA GWQSNDLHPL IIERSEGSYV YDINGNKYLD
101: SLAGLWCTAL GGSEPRLVKA ATEQLNKLPF YHSFWNRTTK PSLDLAQEIL SIFTARKMGK VFFTNSGSEA NDSQVKLVWY YNNALGRPNK KKFIARSKAY
201: HGSTLISASL TGLPALHQKF DLPAPFVLHT DCPHYWRYHL PGETEEEFAT RLATNLENLI LKEGPETIAA FIAEPVMGAG GVIPPPKTYF EKVQAVVKKY
301: DILFIADEVI TAFGRLGTMF GCDYYNIKPD LVSLAKALSN AYVPIGATLV SQEISDVIHS QSNKLGSFAH GFTYSGHPVA CAVAIEALKL YRERDIPGHV
401: KQIAPKFQDG IRAFADSPII GEIRGLGMIM GTEFTNNKSP TDLFPAEWGV GAIFGEECQK RGMLVRVAGD AIMMSPTLIM TPAEVDELVS IYGEALKATE
501: ERVAALKSKK N

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.