CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029083_P001	Maize	extracellular	89.46	92.04
TraesCS4D01G170300.1	Wheat	mitochondrion	90.32	91.5
TraesCS4A01G137000.1	Wheat	mitochondrion	89.68	90.85
TraesCS4B01G167100.1	Wheat	mitochondrion	89.25	90.41
Os03t0338000-01	Rice	peroxisome	89.46	85.95
EES19688	Sorghum	mitochondrion	81.94	79.54
GSMUA_Achr6P32610_001	Banana	mitochondrion	78.06	76.26
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	76.34	74.42
CDY61533	Canola	peroxisome	29.68	73.8
KRH76075	Soybean	mitochondrion	74.84	73.26
VIT_06s0004g07660.t01	Wine grape	mitochondrion	75.27	73.22
KRH00394	Soybean	mitochondrion	74.62	71.99
KRH65497	Soybean	mitochondrion	73.33	71.79
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	73.12	71.13
Solyc10g076250.1.1	Tomato	mitochondrion	72.9	70.92
CDY14465	Canola	cytosol	64.09	70.12
AT3G08860.1	Thale cress	mitochondrion	71.61	69.23
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	67.96	69.0
CDY00650	Canola	mitochondrion	69.68	68.94
CDX73944	Canola	mitochondrion	69.25	68.51
CDY00651	Canola	mitochondrion	69.25	68.51
CDY54458	Canola	mitochondrion	69.25	67.93
Bra005111.1-P	Field mustard	mitochondrion	68.82	67.51
Bra000060.1-P	Field mustard	mitochondrion	69.03	67.44
Bra017119.1-P	Field mustard	mitochondrion	69.03	67.01
CDY54421	Canola	mitochondrion	68.6	66.32
CDY18386	Canola	mitochondrion	32.9	65.67
CDY66720	Canola	mitochondrion	69.46	65.65
CDY61531	Canola	mitochondrion	29.46	65.24
AT2G38400.2	Thale cress	mitochondrion	69.03	65.11
KXG40078	Sorghum	mitochondrion	63.23	61.38
CDY71561	Canola	mitochondrion	28.6	59.91
EES17651	Sorghum	plastid	27.1	27.04
EER91172	Sorghum	mitochondrion	26.45	26.23
KXG22248	Sorghum	plastid	22.58	22.2
EES11419	Sorghum	mitochondrion	24.3	22.11
EES14702	Sorghum	mitochondrion	22.8	20.83

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	EntrezGene:8082323	InterPro:Aminotrans_3	UniProt:C5X0R5
EnsemblPlants:EER94889	ProteinID:EER94889	ProteinID:EER94889.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008453	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3001G379000	SUPFAM:SSF53383	unigene:Sbi.11727
UniParc:UPI0001A82D88	RefSeq:XP_002467891.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:66727103..66730129

Molecular Weight (calculated)

50421.6 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.005

Length

465 amino acids

Sequence
(BLAST)

001: MMQLGAARSL VRRFSRLAAA APADTAAPRM PAFDHVPLPY DGPSAADIAR KRAEYLSPSL FHFYSNPLNI VEGKRQYLYD EHGRRYLDAF AGIATVCCGH
101: CHPDVVDAIT AQAKRLQHST VLYLNHAIAD FAEALASKLP GDLKVVFFTN SGTEANELAI LMARLYTGSH DIISLRNSYH GNAAGTMGAT AQKNWKFNVI
201: QSGVHHAVNP DPYRGAFGSD ADKYVRDVQE IIEFGTTGHV AGFISEAIQG VGGIVEVSPG YLPLAYDKVR KAGGLCIADE VQAGFARVGS HFWGFETHGV
301: VPDIVTMAKG IGNGIPLGAV VTTPEIAQVL TRRCYFNTFG GNPLCTAGGL AVLKVLEKEK LQENAFVVGS YLKDRLRGLQ EKHDIIGDVR GTGFMLGVEL
401: VTDRQLKTPA KDEICHAMEH MKDMGVLVGK GGFYGNVFRI TPPLCFTKED ADFFVEVMDI ALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.