CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61531	Canola	mitochondrion	55.86	59.05
Zm00001d043951_P001	Maize	cytosol	46.4	47.03
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	96.4	46.72
CDX73944	Canola	mitochondrion	98.65	46.6
CDY00650	Canola	mitochondrion	96.85	45.74
CDY00651	Canola	mitochondrion	96.4	45.53
AT3G08860.1	Thale cress	mitochondrion	87.84	40.54
GSMUA_Achr5P08560_001	Banana	peroxisome	60.81	30.96
EES19688	Sorghum	mitochondrion	64.86	30.06
Zm00001d038460_P007	Maize	plasma membrane	63.06	29.85
TraesCS1D01G292100.1	Wheat	mitochondrion	63.96	29.77
TraesCS1B01G308900.1	Wheat	mitochondrion	63.51	29.56
Zm00001d029083_P001	Maize	extracellular	59.91	29.42
TraesCS4B01G167100.1	Wheat	mitochondrion	60.81	29.41
TraesCS1A01G299100.1	Wheat	mitochondrion	63.06	29.35
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	62.16	28.93
TraesCS4D01G170300.1	Wheat	mitochondrion	59.46	28.76
TraesCS4A01G137000.1	Wheat	mitochondrion	59.46	28.76
EER94889	Sorghum	mitochondrion	59.91	28.6
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	61.26	28.45
KRH76075	Soybean	mitochondrion	60.81	28.42
HORVU1Hr1G070220.2	Barley	mitochondrion	63.06	28.34
VIT_06s0004g07660.t01	Wine grape	mitochondrion	60.81	28.24
Solyc10g076250.1.1	Tomato	mitochondrion	60.81	28.24
KRH65497	Soybean	mitochondrion	60.36	28.21
GSMUA_Achr8P17090_001	Banana	peroxisome	56.76	28.19
Zm00001d038453_P003	Maize	mitochondrion	64.41	28.09
Os03t0338000-01	Rice	peroxisome	60.81	27.89
GSMUA_Achr6P32610_001	Banana	mitochondrion	59.01	27.52
CDY54421	Canola	mitochondrion	59.46	27.44
CDY54458	Canola	mitochondrion	58.11	27.22
CDY66720	Canola	mitochondrion	59.46	26.83
KRH00394	Soybean	mitochondrion	58.11	26.76
Os05t0475400-02	Rice	peroxisome	45.95	26.09
CDY14465	Canola	cytosol	47.3	24.71
CDX90347	Canola	mitochondrion	51.35	23.95
CDY41995	Canola	mitochondrion	51.35	23.95
CDY42643	Canola	mitochondrion	51.35	23.95
CDY63451	Canola	mitochondrion	50.45	23.53
CDY37615	Canola	mitochondrion	21.17	10.49
CDY67620	Canola	mitochondrion, plastid	20.72	10.27
CDY39963	Canola	mitochondrion	20.27	9.98
CDX87325	Canola	mitochondrion	20.27	9.98
CDY58748	Canola	mitochondrion	20.27	9.04
CDY35151	Canola	mitochondrion	15.32	8.92
CDY39506	Canola	mitochondrion	19.82	8.7
CDY37389	Canola	mitochondrion	18.92	8.4
CDY10622	Canola	golgi	17.57	8.26
CDY10619	Canola	mitochondrion	18.47	8.2
CDX81186	Canola	plastid	16.22	7.61
CDY41519	Canola	plastid	16.22	7.61
CDY62883	Canola	plastid	16.22	7.61
CDY16715	Canola	plastid	16.22	7.61
CDY68670	Canola	cytosol	12.61	6.28
CDX77642	Canola	mitochondrion	11.26	5.87
CDY33459	Canola	mitochondrion	10.36	5.39
CDY03236	Canola	cytosol	8.11	4.68
GSMUA_Achr1P17230_001	Banana	peroxisome	4.05	3.98
CDY18386	Canola	mitochondrion	4.05	3.86
CDY10621	Canola	extracellular, plastid	2.7	2.54
CDY61533	Canola	peroxisome	0.9	1.07

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.2.6	GO:A0A078K1A9	UniProt:A0A078K1A9	InterPro:Aminotrans_3
EnsemblPlants:CDY71561	ProteinID:CDY71561	ProteinID:CDY71561.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00017109001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0004EEB3E5	SEG:seg	:	:	:

Description

BnaAnng37920DBnaAnng37920D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K1A9]

Coordinates

chrLK046370:+:1390..2447

Molecular Weight (calculated)

24782.7 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.141

Length

222 amino acids

Sequence
(BLAST)

001: MRMLTTAVNT LLKRENYLLQ RHGFAQTVAQ RTNSVHQTET KVPKIPPFSY SPPPYDGPST AEIIAKRREF LSPALFHFYN TPLNIVEGKK QYVFDETGRR
101: YLDAFGGIAT VSCGHSHPEV VESVIKQLKL IQHSTTLYLN HTISDFAEAL VSTLPGDLKV VFFTNSGTEA NELAMMMARL YTGCNDVVSL RNSYHGNAAA
201: TMGATAQSNW KFNVVQVLFL SF

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.