CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76075	Soybean	mitochondrion	94.11	94.11
GSMUA_Achr5P08560_001	Banana	peroxisome	74.74	81.42
KRH00394	Soybean	mitochondrion	81.68	80.5
Os05t0475400-02	Rice	peroxisome	65.68	79.8
CDY61533	Canola	peroxisome	30.53	77.54
GSMUA_Achr8P17090_001	Banana	peroxisome	72.42	76.96
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	76.21	75.89
VIT_06s0004g07660.t01	Wine grape	mitochondrion	76.0	75.52
GSMUA_Achr6P32610_001	Banana	mitochondrion	74.11	73.95
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	74.11	73.64
TraesCS4D01G170300.1	Wheat	mitochondrion	71.16	73.64
TraesCS4B01G167100.1	Wheat	mitochondrion	70.95	73.42
EER94889	Sorghum	mitochondrion	71.79	73.33
EES19688	Sorghum	mitochondrion	73.89	73.28
Solyc10g076250.1.1	Tomato	mitochondrion	73.68	73.22
TraesCS4A01G137000.1	Wheat	mitochondrion	70.53	72.98
Zm00001d038460_P007	Maize	plasma membrane	72.0	72.92
CDY00650	Canola	mitochondrion	70.95	71.7
TraesCS1D01G292100.1	Wheat	mitochondrion	71.58	71.28
CDY00651	Canola	mitochondrion	70.53	71.28
TraesCS1B01G308900.1	Wheat	mitochondrion	71.37	71.07
TraesCS1A01G299100.1	Wheat	mitochondrion	71.37	71.07
CDY14465	Canola	cytosol	63.37	70.82
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	68.21	70.74
CDX73944	Canola	mitochondrion	69.89	70.64
Os03t0338000-01	Rice	peroxisome	71.58	70.25
AT3G08860.1	Thale cress	mitochondrion	70.95	70.06
CDY18386	Canola	mitochondrion	34.11	69.53
Zm00001d029083_P001	Maize	extracellular	66.11	69.47
CDY54421	Canola	mitochondrion	70.11	69.23
Bra017119.1-P	Field mustard	mitochondrion	69.68	69.1
Bra000060.1-P	Field mustard	mitochondrion	68.84	68.7
Zm00001d038453_P003	Maize	mitochondrion	73.47	68.57
CDY54458	Canola	mitochondrion	68.21	68.35
Bra005111.1-P	Field mustard	mitochondrion	67.79	67.93
AT2G38400.2	Thale cress	mitochondrion	70.32	67.75
HORVU1Hr1G070220.2	Barley	mitochondrion	70.32	67.61
CDY66720	Canola	mitochondrion	69.47	67.07
CDY61531	Canola	mitochondrion	28.0	63.33
GSMUA_Achr1P17230_001	Banana	peroxisome	29.89	62.83
Zm00001d043951_P001	Maize	cytosol	28.84	62.56
CDY71561	Canola	mitochondrion	28.21	60.36
KRH43286	Soybean	mitochondrion	59.79	59.79
KRH31231	Soybean	mitochondrion	58.95	59.2
KRH59427	Soybean	mitochondrion	59.37	59.12
KRG97644	Soybean	mitochondrion	45.05	55.01
KRH45041	Soybean	extracellular, mitochondrion	9.26	29.53
KRH04754	Soybean	cytosol	8.0	27.94
KRH48868	Soybean	nucleus	27.37	27.84
KRH35638	Soybean	cytosol	26.74	27.43
KRH58670	Soybean	mitochondrion	25.26	25.59
KRH42566	Soybean	mitochondrion	25.05	25.48
KRH60678	Soybean	nucleus	22.11	22.34
KRH51376	Soybean	plastid	21.89	22.32
KRH24110	Soybean	mitochondrion	24.0	22.22
KRH29085	Soybean	cytosol	23.79	21.32
KRH17479	Soybean	plastid	16.42	18.8

Protein Annotations

EntrezGene:100170738	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	EMBL:ACUP02001360	InterPro:Aminotrans_3
EnsemblPlantsGene:GLYMA_03G040600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008453	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	UniProt:I1JL13	InterPro:IPR015421	InterPro:IPR015422
EnsemblPlants:KRH65497	ProteinID:KRH65497	ProteinID:KRH65497.1	ProteinID:KRH65498.1	ProteinID:KRH65499.1	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000233A350	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:5113019..5121557

Molecular Weight (calculated)

51813.4 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.013

Length

475 amino acids

Sequence
(BLAST)

001: MAVSLATRLV RRRSPPLLWR RSFSMSAVDA EKEVVVVPEL PPFDYSPPPY AGPTAEEILA KRREYLSPSI LHSYKNPVNI VEGKKQYLFD EKGRRYVDAF
101: GGIATVCCGH CHHDVVEAIV NQTKKLQHST VLYLNHAITD FAQALASKLP SDLKVVFFTN SGTEANELAM LIARLYTGCH DIISLRNAYH GNATGTMAAT
201: AQSIWKFNVV QSGVHHAVNP DPYRGIFGSD GEKYARDVQD IINFGTSGNV AAFISEAIQG VGGIIELAPG YLPVVYNAIK KAGGLFIADE VQAGFGRTGS
301: HFWGFEAHNV VPDIVTIAKG IGNGIPLGAV VTTPEIAEVL TRRSYFNTFG GNPVCTAAGL AVLKVIEKEQ LQQNAFVVGS HLKERLTALK DKYELIGDVR
401: GRGLMLGVEL VTDRELKTPA KNETLHVMDQ MKELGVLIGK GGYYGNVFRI TPPLCFTKED ADFVADAMDL TLSRM

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.