CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42566	Soybean	mitochondrion	95.74	96.15
KRH45041	Soybean	extracellular, mitochondrion	29.64	93.29
KRH04754	Soybean	cytosol	26.44	91.18
Solyc08g048450.2.1	Tomato	cytosol, plastid	68.02	75.06
VIT_10s0003g03870.t01	Wine grape	mitochondrion	73.77	74.25
PGSC0003DMT400076803	Potato	cytosol, extracellular, mitochondrion	37.74	71.08
Bra025033.1-P	Field mustard	mitochondrion	72.28	71.07
AT5G46180.1	Thale cress	mitochondrion	70.79	69.89
GSMUA_Achr10P...	Banana	mitochondrion	70.15	69.41
CDY33459	Canola	mitochondrion	61.41	67.45
Bra017570.1-P	Field mustard	mitochondrion	41.58	67.24
CDX77642	Canola	mitochondrion	60.98	67.14
TraesCS5B01G376900.1	Wheat	mitochondrion	66.95	67.09
TraesCS5D01G384500.1	Wheat	mitochondrion	67.59	67.02
TraesCS5A01G375000.1	Wheat	mitochondrion	67.38	66.95
EER91172	Sorghum	mitochondrion	66.52	66.52
Os03t0643300-02	Rice	mitochondrion	66.95	66.38
HORVU5Hr1G092960.5	Barley	cytosol	65.67	65.12
Zm00001d033228_P002	Maize	mitochondrion	66.52	63.93
CDY35151	Canola	mitochondrion	51.39	63.25
CDY03236	Canola	cytosol	42.64	51.95
KRH35638	Soybean	cytosol	29.64	30.02
KRH48868	Soybean	nucleus	29.21	29.34
KRH00394	Soybean	mitochondrion	27.93	27.18
KRH59427	Soybean	mitochondrion	27.08	26.62
KRH43286	Soybean	mitochondrion	26.65	26.32
KRH31231	Soybean	mitochondrion	26.01	25.79
KRH76075	Soybean	mitochondrion	26.01	25.68
KRH65497	Soybean	mitochondrion	25.59	25.26
KRH60678	Soybean	nucleus	24.09	24.04
KRH51376	Soybean	plastid	23.88	24.03
KRH24110	Soybean	mitochondrion	26.01	23.78
KRG97644	Soybean	mitochondrion	18.98	22.88
KRH29085	Soybean	cytosol	25.37	22.45
KRH17479	Soybean	plastid	19.62	22.17

Protein Annotations

KEGG:00330+2.6.1.13	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.4.2.2	EMBL:ACUP02003280	InterPro:Aminotrans_3
EnsemblPlantsGene:GLYMA_05G141900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004587	GO:GO:0005488	GO:GO:0005515
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	UniProt:I1K3G1	InterPro:IPR015421
InterPro:IPR015422	EnsemblPlants:KRH58670	ProteinID:KRH58670	ProteinID:KRH58670.1	InterPro:Orn_aminotrans	InterPro:Orn_aminotrans_mito
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF18	MetaCyc:PWY-3341
MetaCyc:PWY-4981	MetaCyc:PWY-6344	MetaCyc:PWY-6922	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TIGRFAMs:TIGR01885	UniParc:UPI00023C478D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:33519063..33528740

Molecular Weight (calculated)

51433.2 Da

IEP (calculated)

7.936

GRAVY (calculated)

-0.116

Length

469 amino acids

Sequence
(BLAST)

001: MAATRPVQCL LRRVCRGSRS FGVATEVNAS SSSSSQKIID KEYEHSAHNY HPLPIVFSQA KGTSVWDPEG NKYLDFLSGY SAVNQGHCHP KILKALQEQA
101: QRLTVSSRAF YNDRFPVFAE YVTNMFGYDM VLPMNTGAEG VETALKLARK WGYEKKRIPK DEAIIVSCCG CFHGRTLGVI SLSCDNEATR GFGPLLPGNL
201: KVDFGDAEAL ERIFKEKGEH IAAFILEPIQ GEAGVIFPPD GYLKAVRDIC SKYNVLMIAD EIQTGLARTG KMLACEWEEV RPDIVILGKA LGGGVIPVSA
301: VLADKDVMLC IQPGQHGSTF GGNPLASAVA IASLEVIKNE RLVERSAQMG EELAGQLLKI QQQYPDYVKE VRGRGLFIGV EFNSKNLFPV SGYELCKKLK
401: YRGVLAKPTH DTIIRFTPPL CISLDEIQQG SKVLADVLEI DLPKLQKTKP KDAAPVASSA CDRCGRVLY

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.