Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 22908117
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076803 Potato cytosol, extracellular, mitochondrion 56.47 96.39
VIT_10s0003g03870.t01 Wine grape mitochondrion 79.76 72.75
KRH45041 Soybean extracellular, mitochondrion 24.24 69.13
KRH58670 Soybean mitochondrion 75.06 68.02
KRH04754 Soybean cytosol 21.65 67.65
KRH42566 Soybean mitochondrion 73.88 67.24
AT5G46180.1 Thale cress mitochondrion 74.82 66.95
Bra025033.1-P Field mustard mitochondrion 75.06 66.88
EER91172 Sorghum mitochondrion 73.65 66.74
TraesCS5B01G376900.1 Wheat mitochondrion 73.41 66.67
GSMUA_Achr10P... Banana mitochondrion 74.12 66.46
TraesCS5D01G384500.1 Wheat mitochondrion 73.88 66.38
TraesCS5A01G375000.1 Wheat mitochondrion 73.41 66.1
HORVU5Hr1G092960.5 Barley cytosol 72.94 65.54
Os03t0643300-02 Rice mitochondrion 72.47 65.12
CDY33459 Canola mitochondrion 64.0 63.7
CDX77642 Canola mitochondrion 63.53 63.38
Zm00001d033228_P002 Maize mitochondrion 72.71 63.32
Bra017570.1-P Field mustard mitochondrion 41.41 60.69
CDY35151 Canola mitochondrion 52.94 59.06
CDY03236 Canola cytosol 44.71 49.35
Solyc08g080370.2.1 Tomato plastid 29.88 27.61
Solyc12g006470.1.1 Tomato extracellular, nucleus 27.53 25.55
Solyc08g014610.2.1 Tomato cytosol 27.06 25.11
Solyc10g076250.1.1 Tomato mitochondrion 26.82 23.85
Solyc04g054310.2.1 Tomato extracellular, plastid 24.71 22.2
Solyc12g006450.1.1 Tomato plastid 26.82 22.09
Solyc07g043310.2.1 Tomato nucleus 25.65 21.16
Solyc04g009200.2.1 Tomato plastid 23.29 20.54
Protein Annotations
KEGG:00330+2.6.1.13Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.1.1.1.4.2.2InterPro:Aminotrans_3GO:GO:0003674
GO:GO:0003824GO:GO:0004587GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006561GO:GO:0006593GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0008483GO:GO:0009056
GO:GO:0009058GO:GO:0009408GO:GO:0009413GO:GO:0009414GO:GO:0009605GO:GO:0009607
GO:GO:0009628GO:GO:0009651GO:GO:0009719GO:GO:0009733GO:GO:0009737GO:GO:0009741
GO:GO:0009753GO:GO:0009816GO:GO:0009987GO:GO:0016740GO:GO:0019544GO:GO:0030170
GO:GO:0042538GO:GO:0042802GO:GO:0051646InterPro:IPR015421InterPro:IPR015422UniProt:K4CKJ6
InterPro:Orn_aminotransInterPro:Orn_aminotrans_mitoPFAM:PF00202PIRSF:PIRSF000521ScanProsite:PS00600PANTHER:PTHR11986
PANTHER:PTHR11986:SF18InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383EnsemblPlantsGene:Solyc08g048450.2
EnsemblPlants:Solyc08g048450.2.1TIGRFAMs:TIGR01885UniParc:UPI000276C86D:::
Description
Ornithine aminotransferase, mitochondrial [Source:Projected from Arabidopsis thaliana (AT5G46180) UniProtKB/Swiss-Prot;Acc:Q9FNK4]
Coordinates
chr8:+:12865193..12876961
Molecular Weight (calculated)
46523.6 Da
IEP (calculated)
6.928
GRAVY (calculated)
-0.036
Length
425 amino acids
Sequence
(BLAST)
001: MDYHPIPIVF SKAKGSSVWD PEGKKYLDFL SAYSAINQGH CHPKIMKVLA EQAQMLTLSS RAFYNDKFPV FAERITSMFG YDMVLPMNTG AEGVETALKL
101: ARKWGYMKKS IPKNEALIVS CCGCFHGRTL AAISMSCDNE ATHGFWPLLP GQLKVDFGDS VALEKLFKEK GDQIAGFLIE PIQGEAGVII PPEGYLTAVR
201: DLCSKYNILM IADEIQSGLA RSGRLLACDW EEVRPDVVIL GKALGGGVLP VSAVLADKYV MLCIQAGEHG STFGGNPLAS AVAIASLDVI RDEGLAERSA
301: QMGEQLRHQL IKIQRQFPHF IKEVRGKGLF NAVELNSNSL LPVTAYDICM KLKERGILAK PTHDSIIRLT PPLSMSLEEL QEGSNALHDV LVHDLPKMQK
401: EKPATVSHAT SNVCDRCGRD LYGSS
Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)
001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA
Arabidopsis Description
DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.