CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58670	Soybean	mitochondrion	96.15	95.74
KRH45041	Soybean	extracellular, mitochondrion	28.91	90.6
KRH04754	Soybean	cytosol	25.7	88.24
Solyc08g048450.2.1	Tomato	cytosol, plastid	67.24	73.88
VIT_10s0003g03870.t01	Wine grape	mitochondrion	73.23	73.39
PGSC0003DMT400076803	Potato	cytosol, extracellular, mitochondrion	37.69	70.68
Bra025033.1-P	Field mustard	mitochondrion	71.31	69.81
GSMUA_Achr10P...	Banana	mitochondrion	70.24	69.2
AT5G46180.1	Thale cress	mitochondrion	70.24	69.05
CDY33459	Canola	mitochondrion	60.81	66.51
TraesCS5D01G384500.1	Wheat	mitochondrion	67.24	66.38
TraesCS5A01G375000.1	Wheat	mitochondrion	67.02	66.31
TraesCS5B01G376900.1	Wheat	mitochondrion	66.38	66.24
CDX77642	Canola	mitochondrion	60.39	66.2
Os03t0643300-02	Rice	mitochondrion	66.81	65.96
EER91172	Sorghum	mitochondrion	66.17	65.88
Bra017570.1-P	Field mustard	mitochondrion	40.9	65.86
HORVU5Hr1G092960.5	Barley	cytosol	65.31	64.48
Zm00001d033228_P002	Maize	mitochondrion	65.95	63.11
CDY35151	Canola	mitochondrion	50.75	62.2
CDY03236	Canola	cytosol	42.4	51.43
KRH35638	Soybean	cytosol	29.34	29.59
KRH48868	Soybean	nucleus	28.69	28.69
KRH00394	Soybean	mitochondrion	27.19	26.35
KRH59427	Soybean	mitochondrion	26.34	25.79
KRH43286	Soybean	mitochondrion	26.12	25.68
KRH76075	Soybean	mitochondrion	25.91	25.47
KRH65497	Soybean	mitochondrion	25.48	25.05
KRH31231	Soybean	mitochondrion	25.05	24.74
KRH24110	Soybean	mitochondrion	26.77	24.37
KRH60678	Soybean	nucleus	23.98	23.83
KRH51376	Soybean	plastid	23.77	23.82
KRH29085	Soybean	cytosol	26.12	23.02
KRG97644	Soybean	mitochondrion	18.42	22.11
KRH17479	Soybean	plastid	19.49	21.93

Protein Annotations

KEGG:00330+2.6.1.13	EntrezGene:100801609	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.4.2.2	EMBL:ACUP02004816
InterPro:Aminotrans_3	EnsemblPlantsGene:GLYMA_08G097800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004587	GO:GO:0005488
GO:GO:0005515	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	UniProt:I1KRV5
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH42566	ProteinID:KRH42566	ProteinID:KRH42566.1	InterPro:Orn_aminotrans
InterPro:Orn_aminotrans_mito	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF18
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	MetaCyc:PWY-6922	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR01885	UniParc:UPI0001CABF7D	:	:

Description

hypothetical protein

Coordinates

chr8:+:7477627..7485199

Molecular Weight (calculated)

51187.0 Da

IEP (calculated)

7.377

GRAVY (calculated)

-0.113

Length

467 amino acids

Sequence
(BLAST)

001: MAATRPVQCL LRRVCRGSRT IGVATEVNAS SSSQKIIDKE YEHSAHNYHP LPIVFAQAKG TSVWDPEGNK YLDFLSGYSA VNQGHCHPKI LKALQEQAER
101: LTVSSRAFYN DRFPDFAEYV TNMFGYDMVL PMNTGAEGVE TALKLARKWG YEKKRIPKDE AIIVSCCGCF HGRTLGVISL SCDNEATRGF GPLLPGNLKV
201: DFGDAEALEQ IFKEKGEHIA AFILEPVQGE AGVIFPPDGY LKAVRDLCSK YNVLMIADEI QTGLARTGKM LACEWEEVRP DVLILGKALG GGVIPVSAVL
301: ADKDVMLCIQ PGQHGSTFGG NPMASAVAIA SLEVIKNERL VERSAQMGEE LTGQLLKIQQ QYPDYVKEVR GRGLFIGVEF NSKKLFPVSG YELCKKLKYR
401: GVLAKPTHDA IIRFTPPLCI SVDEIQQGSK ALADVLEIDL PKLQKTKPID AAPVATSACD RCGRVLY

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.