CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76075	Soybean	mitochondrion	80.71	81.89
KRH65497	Soybean	mitochondrion	80.5	81.68
CDY61533	Canola	peroxisome	31.33	80.75
Os05t0475400-02	Rice	peroxisome	64.52	79.54
GSMUA_Achr5P08560_001	Banana	peroxisome	70.75	78.21
TraesCS4D01G170300.1	Wheat	mitochondrion	71.37	74.95
EER94889	Sorghum	mitochondrion	71.99	74.62
TraesCS4A01G137000.1	Wheat	mitochondrion	70.95	74.51
VIT_06s0004g07660.t01	Wine grape	mitochondrion	73.44	74.06
TraesCS4B01G167100.1	Wheat	mitochondrion	70.33	73.86
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	73.03	73.79
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	72.82	73.43
GSMUA_Achr6P32610_001	Banana	mitochondrion	71.78	72.69
GSMUA_Achr8P17090_001	Banana	peroxisome	67.22	72.48
EES19688	Sorghum	mitochondrion	71.99	72.44
Solyc10g076250.1.1	Tomato	mitochondrion	71.58	72.18
Zm00001d038460_P007	Maize	plasma membrane	70.12	72.07
Zm00001d029083_P001	Maize	extracellular	67.01	71.46
Os03t0338000-01	Rice	peroxisome	71.58	71.28
TraesCS1A01G299100.1	Wheat	mitochondrion	70.54	71.28
TraesCS1B01G308900.1	Wheat	mitochondrion	70.54	71.28
CDY18386	Canola	mitochondrion	34.44	71.24
TraesCS1D01G292100.1	Wheat	mitochondrion	70.33	71.07
CDY00650	Canola	mitochondrion	69.29	71.06
CDY14465	Canola	cytosol	62.66	71.06
AT3G08860.1	Thale cress	mitochondrion	70.75	70.89
CDY00651	Canola	mitochondrion	68.88	70.64
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	67.01	70.52
CDX73944	Canola	mitochondrion	68.67	70.43
CDY54458	Canola	mitochondrion	68.26	69.41
Bra000060.1-P	Field mustard	mitochondrion	68.46	69.33
Bra017119.1-P	Field mustard	mitochondrion	68.88	69.31
CDY54421	Canola	mitochondrion	68.67	68.81
Bra005111.1-P	Field mustard	mitochondrion	67.43	68.57
Zm00001d038453_P003	Maize	mitochondrion	71.58	67.78
CDY66720	Canola	mitochondrion	68.88	67.48
HORVU1Hr1G070220.2	Barley	mitochondrion	69.09	67.41
AT2G38400.2	Thale cress	mitochondrion	68.26	66.73
CDY61531	Canola	mitochondrion	27.18	62.38
KRH43286	Soybean	mitochondrion	58.92	59.79
KRH59427	Soybean	mitochondrion	59.13	59.75
Zm00001d043951_P001	Maize	cytosol	26.97	59.36
GSMUA_Achr1P17230_001	Banana	peroxisome	27.8	59.29
KRH31231	Soybean	mitochondrion	57.88	58.99
CDY71561	Canola	mitochondrion	26.76	58.11
KRG97644	Soybean	mitochondrion	44.61	55.27
KRH45041	Soybean	extracellular, mitochondrion	9.54	30.87
KRH58670	Soybean	mitochondrion	27.18	27.93
KRH48868	Soybean	nucleus	26.97	27.84
KRH35638	Soybean	cytosol	26.35	27.43
KRH04754	Soybean	cytosol	7.68	27.21
KRH42566	Soybean	mitochondrion	26.35	27.19
KRH60678	Soybean	nucleus	20.54	21.06
KRH51376	Soybean	plastid	20.33	21.03
KRH24110	Soybean	mitochondrion	21.78	20.47
KRH29085	Soybean	cytosol	21.37	19.43
KRH17479	Soybean	plastid	16.18	18.8

Protein Annotations

EntrezGene:100797583	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	UniProt:A0A0R0F2G6	EMBL:ACUP02011440
InterPro:Aminotrans_3	EnsemblPlantsGene:GLYMA_18G210500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH00394	ProteinID:KRH00394
ProteinID:KRH00394.1	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00018C6B59	:

Description

hypothetical protein

Coordinates

chr18:-:49642348..49649886

Molecular Weight (calculated)

52562.0 Da

IEP (calculated)

8.062

GRAVY (calculated)

-0.111

Length

482 amino acids

Sequence
(BLAST)

001: MTGSLAARLV LRRCRSPASQ FFFRREASWP ATERTTKDVV TSPPKELPAF DYSPPAYSGP SRDEIIAKRR EYLSPSIFHN YKSPLNVVEG KRQYLFDDKG
101: RRYLDAFGGI ATVCCGHCHP DVVEAIVEQT KRLQHSTVLY LNHAITDFAE ALAAKLPGNL KVAFFTNSGT EANELAILIA KLYTGSHDII SLRNSYHGNG
201: GGTMGTTAQS IWKYNVVQSG VHHAVNPDPY RGLFGSDGEK YVRDVQEIIN FGTSGNVAAF ISEAIQGVGG IVELAPGYLP AAYDIVRKAG GLCIADEVQT
301: GIARTGSHFW GFEAHGVVPD IVTIAKSIGN GIPLGAVVTT PEIAKALTRR SYFNTFGGNP VCTAAGLAVL RVIEKEKLQE NAFVVGSYLK ERLNALKDKY
401: ELIGDVRGRG MMLGVELVSD GKLKTPAQSE TLHVMDQMKE LGVLIGKGGY YGNVFRITPP LCFTKEDADF LVDAMDYTFS RM

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.