CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005111.1-P	Field mustard	mitochondrion	98.73	98.73
CDY61531	Canola	mitochondrion	42.62	96.19
CDY61533	Canola	peroxisome	37.76	95.72
CDY18386	Canola	mitochondrion	44.09	89.7
CDY54421	Canola	mitochondrion	88.61	87.32
CDY14465	Canola	cytosol	77.64	86.59
CDY66720	Canola	mitochondrion	88.4	85.16
AT2G38400.2	Thale cress	mitochondrion	86.71	83.37
Os05t0475400-02	Rice	peroxisome	62.45	75.7
GSMUA_Achr5P08560_001	Banana	peroxisome	69.62	75.69
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	75.11	74.63
VIT_06s0004g07660.t01	Wine grape	mitochondrion	72.57	71.97
GSMUA_Achr8P17090_001	Banana	peroxisome	67.72	71.81
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	71.31	70.71
Solyc10g076250.1.1	Tomato	mitochondrion	70.46	69.87
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.62	69.33
KRH76075	Soybean	mitochondrion	69.41	69.26
EER94889	Sorghum	mitochondrion	67.93	69.25
EES19688	Sorghum	mitochondrion	69.83	69.1
TraesCS1D01G292100.1	Wheat	mitochondrion	69.41	68.97
TraesCS1B01G308900.1	Wheat	mitochondrion	69.2	68.76
CDY00650	Canola	mitochondrion	68.14	68.72
TraesCS4A01G137000.1	Wheat	mitochondrion	66.46	68.63
CDY00651	Canola	mitochondrion	67.93	68.51
CDX73944	Canola	mitochondrion	67.93	68.51
TraesCS4B01G167100.1	Wheat	mitochondrion	66.24	68.41
TraesCS4D01G170300.1	Wheat	mitochondrion	66.24	68.41
TraesCS1A01G299100.1	Wheat	mitochondrion	68.78	68.34
KRH00394	Soybean	mitochondrion	69.41	68.26
KRH65497	Soybean	mitochondrion	68.35	68.21
Zm00001d038460_P007	Maize	plasma membrane	67.09	67.8
Os03t0338000-01	Rice	peroxisome	67.93	66.53
Zm00001d029083_P001	Maize	extracellular	62.45	65.49
HORVU1Hr1G070220.2	Barley	mitochondrion	67.93	65.18
Zm00001d038453_P003	Maize	mitochondrion	68.78	64.05
CDX90347	Canola	mitochondrion	60.34	60.08
CDY63451	Canola	mitochondrion	59.92	59.66
CDY42643	Canola	mitochondrion	59.7	59.45
CDY41995	Canola	mitochondrion	59.28	59.03
CDY71561	Canola	mitochondrion	27.22	58.11
GSMUA_Achr1P17230_001	Banana	peroxisome	27.22	57.08
Zm00001d043951_P001	Maize	cytosol	26.37	57.08
CDY67620	Canola	mitochondrion, plastid	25.95	27.46
CDY37615	Canola	mitochondrion	25.95	27.46
CDX87325	Canola	mitochondrion	25.95	27.27
CDX77642	Canola	mitochondrion	24.47	27.23
CDY39963	Canola	mitochondrion	25.74	27.05
CDY33459	Canola	mitochondrion	24.05	26.7
CDY35151	Canola	mitochondrion	20.25	25.2
CDY58748	Canola	mitochondrion	23.63	22.49
CDY03236	Canola	cytosol	18.14	22.34
CDY37389	Canola	mitochondrion	23.42	22.2
CDY68670	Canola	cytosol	20.89	22.2
CDY39506	Canola	mitochondrion	23.63	22.13
CDY10619	Canola	mitochondrion	23.21	22.0
CDY10622	Canola	golgi	21.1	21.19
CDY41519	Canola	plastid	20.04	20.08
CDY62883	Canola	plastid	20.04	20.08
CDY10621	Canola	extracellular, plastid	9.92	19.92
CDX81186	Canola	plastid	19.83	19.87
CDY16715	Canola	plastid	19.62	19.66

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078ITH9	UniProt:A0A078ITH9	InterPro:Aminotrans_3
EnsemblPlants:CDY54458	ProteinID:CDY54458	ProteinID:CDY54458.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00014123001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EF388C	SEG:seg	:

Description

BnaAnng13240DBnaAnng13240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITH9]

Coordinates

chrLK033321:+:49302..51648

Molecular Weight (calculated)

51777.4 Da

IEP (calculated)

7.353

GRAVY (calculated)

-0.054

Length

474 amino acids

Sequence
(BLAST)

001: MQRFSAKSTF QNIPISLLRR CISSTSQTAM AASDEFLGRL PPFEYIPPPY TGPSADVILN QRKEFLSSYT SCLYKKPLNI VDGKMQYLFD ESGRRYLDAF
101: AGIAVVNCGH CHPDVVKPVI EQIKRLQHPT TLYLNHAIAD FSEALASKLP GDLKVVFFTN SGTEANELAL MMAKLYTGYQ DIVSIRNGYH GNAAGTMGAT
201: GQSMWKFNVV QTGTHHALNP DPYRGVFGSD GEKYARELHD LIQYGTTGHI AGFVFEAIQG VGGIMELAPG YLSAAYDIVK KAGGLFIADE VQSGFARTGD
301: FWGFEAHNVV PDIVTMAKGI GNGFPLGAVV TTPEIARVLT RRCYFNTFGG NAVATTAGLA VLNVIEKDKL QENASMVGSY LKGRLNQLKE KHEIIGDVRG
401: RGLMLGVELV SDRKLKTPAT AETLHIMDQM KELGVLVGKG GFFGNVFRIT PPLCFTKDDA DYLVEAMDYS VSKM

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.