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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008457.1-P Field mustard cytosol, peroxisome, plastid 98.21 89.57
CDY37615 Canola mitochondrion 64.35 64.06
CDY67620 Canola mitochondrion, plastid 63.9 63.62
CDY39963 Canola mitochondrion 62.56 61.86
CDX87325 Canola mitochondrion 62.33 61.64
AT1G80600.1 Thale cress plastid 61.44 59.96
GSMUA_Achr9P04450_001 Banana cytosol 50.0 55.61
GSMUA_Achr11P... Banana cytosol 45.74 55.59
Os05t0129100-00 Rice plastid 39.46 53.99
Os07t0461900-01 Rice plastid 39.24 53.35
VIT_09s0002g08670.t01 Wine grape plastid 53.14 51.19
PGSC0003DMT400058543 Potato cytosol, plastid 51.79 50.55
KRH48868 Soybean nucleus 52.69 50.32
Solyc08g080370.2.1 Tomato plastid 51.79 50.22
KRH35638 Soybean cytosol 51.35 49.46
VIT_19s0027g01790.t01 Wine grape plastid 50.45 48.18
TraesCS1B01G090600.1 Wheat plastid 46.86 45.43
TraesCS1A01G072200.1 Wheat plastid 46.19 45.08
TraesCS1D01G074600.1 Wheat plastid 46.19 44.78
EES17651 Sorghum plastid 45.96 43.99
GSMUA_Achr5P28220_001 Banana cytosol 23.77 43.62
Zm00001d035443_P001 Maize plastid 45.74 41.21
HORVU1Hr1G015560.5 Barley plastid 46.41 40.43
CDY61533 Canola peroxisome 11.88 28.34
CDY18386 Canola mitochondrion 12.78 24.46
CDY14465 Canola cytosol 21.97 23.06
CDY54421 Canola mitochondrion 22.65 21.0
CDY54458 Canola mitochondrion 22.2 20.89
CDY35151 Canola mitochondrion 17.26 20.21
CDY66720 Canola mitochondrion 22.2 20.12
CDX90347 Canola mitochondrion 20.85 19.54
CDY03236 Canola cytosol 16.82 19.48
CDY41995 Canola mitochondrion 20.63 19.33
CDY42643 Canola mitochondrion 20.63 19.33
CDY63451 Canola mitochondrion 20.63 19.33
CDY33459 Canola mitochondrion 18.39 19.2
CDX77642 Canola mitochondrion 17.94 18.78
CDX73944 Canola mitochondrion 19.51 18.51
CDY00651 Canola mitochondrion 19.28 18.3
CDY00650 Canola mitochondrion 19.28 18.3
CDY10622 Canola golgi 18.83 17.8
CDY58748 Canola mitochondrion 19.73 17.67
CDY37389 Canola mitochondrion 19.73 17.6
CDY10619 Canola mitochondrion 19.73 17.6
CDY39506 Canola mitochondrion 19.73 17.39
CDY41519 Canola plastid 17.26 16.28
CDY62883 Canola plastid 17.26 16.28
CDY16715 Canola plastid 16.82 15.86
CDX81186 Canola plastid 16.82 15.86
CDY61531 Canola mitochondrion 6.73 14.29
CDY10621 Canola extracellular, plastid 7.4 13.98
CDY71561 Canola mitochondrion 6.28 12.61
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:35.1GO:A0A078JQD7UniProt:A0A078JQD7InterPro:Aminotrans_3
EnsemblPlants:CDY68670ProteinID:CDY68670ProteinID:CDY68670.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0008483GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0030170
EnsemblPlantsGene:GSBRNA2T00076587001InterPro:IPR015421InterPro:IPR015422PFAM:PF00202PANTHER:PTHR11986PANTHER:PTHR11986:SF79
InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383TMHMM:TMhelixUniParc:UPI0004EEA89C
SEG:seg:::::
Description
BnaA02g36300DBnaA02g36300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQD7]
Coordinates
chrLK037774:+:502..3803
Molecular Weight (calculated)
48836.3 Da
IEP (calculated)
6.899
GRAVY (calculated)
-0.013
Length
446 amino acids
Sequence
(BLAST)
001: MSIFRIAVNA LGHADPDWLQ PVTDQAALLA HVSNVYYTIP QTELSKRLVA SSFAERVFSC NSGTEANEAA IKFSRKFQRF THPEDKEVAT SFIAFTNSFH
101: GVTFLEYGNS QAATDLIRSG KIADVFVEPI QEEGGVHSAT KEFLQSLRLA CDAAGSLLVF DEVSDNMSRT ILDLFFWFCY FSMFSVVWVE VVTYGLWAFE
201: AFGVTPDIMT VAKSLAGGLP IGVMLVTEKV AETIKYGDHG SIFAGNPLVC SAAIAVFDKV SKPSFLASVS SKGLYFKDLL VKKLGGNLHV KKVRGEGLII
301: GVELDVSASP LVDACCGSRL LILILTAGKG NVVPPLIIEK EEIGRANSAH HEVSNRDSQD RYGRWSGDSC IIGKPYDARY GRRYAPYEQR TPYHSKEKYK
401: KGGESGFYKA VNPFAITEGA SKALSLQRVQ DDHVVAMASK TDETAR
Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)
001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD
Arabidopsis Description
WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.