Factsheet for Os05t0129100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0461900-01	Rice	plastid	92.02	91.46
TraesCS1A01G072200.1	Wheat	plastid	82.52	58.86
TraesCS1D01G074600.1	Wheat	plastid	82.82	58.7
TraesCS1B01G090600.1	Wheat	plastid	82.21	58.26
GSMUA_Achr11P...	Banana	cytosol	62.58	55.59
GSMUA_Achr9P04450_001	Banana	cytosol	67.18	54.61
EES17651	Sorghum	plastid	77.3	54.08
HORVU1Hr1G015560.5	Barley	plastid	83.13	52.93
Zm00001d035443_P001	Maize	plastid	73.93	48.69
KRH35638	Soybean	cytosol	69.02	48.6
VIT_09s0002g08670.t01	Wine grape	plastid	68.71	48.38
PGSC0003DMT400058543	Potato	cytosol, plastid	67.48	48.14
Bra008453.1-P	Field mustard	plastid	65.95	47.99
CDY37615	Canola	mitochondrion	65.95	47.99
CDY67620	Canola	mitochondrion, plastid	65.95	47.99
Bra035168.1-P	Field mustard	mitochondrion	66.26	47.89
CDX87325	Canola	mitochondrion	66.26	47.89
Solyc08g080370.2.1	Tomato	plastid	67.48	47.83
VIT_19s0027g01790.t01	Wine grape	plastid	68.4	47.75
KRH48868	Soybean	nucleus	68.4	47.75
CDY39963	Canola	mitochondrion	65.95	47.67
AT1G80600.1	Thale cress	plastid	65.95	47.05
GSMUA_Achr5P28220_001	Banana	cytosol	34.05	45.68
CDY68670	Canola	cytosol	53.99	39.46
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	53.99	35.99
Os05t0475400-02	Rice	peroxisome	26.38	21.99
Os03t0338000-01	Rice	peroxisome	28.83	19.42
Os08t0532200-01	Rice	plastid	27.3	18.62
Os03t0643300-02	Rice	mitochondrion	26.69	18.39
Os03t0171900-01	Rice	mitochondrion	26.69	17.9
Os02t0112900-00	Rice	cytosol	24.85	16.77
Os04t0614600-01	Rice	mitochondrion	24.85	15.7
Os08t0205900-01	Rice	mitochondrion	23.93	15.29
Os04t0614500-01	Rice	plastid	23.01	15.09

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	UniProt:A0A0P0WHN0	InterPro:Aminotrans_3	ProteinID:BAS92099.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006525	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlantsGene:Os05g0129100	EnsemblPlants:Os05t0129100-00	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000393B6D9	:	:	:	:

Description

Similar to Acetylornithine aminotransferase, mitochondrial. (Os05t0129100-00)

Coordinates

chr5:+:1705440..1706779

Molecular Weight (calculated)

34961.5 Da

IEP (calculated)

9.620

GRAVY (calculated)

0.069

Length

326 amino acids

Sequence
(BLAST)

001: SRTRHAHRPP RVRRIVQPTS RHAKLTVIIS FFRVQVALAK RLVEASFADR VFFANTGTEA NEAAIKFARK FQRVARPDGD APTEFMSFTN CFHGRTMGSL
101: ALTSKVQYRE PFAPVMPGAT FAEYGNLEEA KKVIQSGKIA AVFVEPVQGE GGIHSATKEF LQGLRDACDE AGALLVFDEV QCGLGRTGYL WAYEAYGVLP
201: DIMTLAKPLA GGLPIGVVLV TEKVASAINF GDHGTTFGGG PLVCQAALTT LDKIQKPGFL AEVAKKGENF KQLLSTKLSG NAHVKEIRGI GLIVGIELDV
301: PAGPLVDACL DRGVIVLTAG KGNVVR

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.