Factsheet for Os03t0338000-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	peroxisome
YLoc:	peroxisome

mitochondrion: 23257241
peroxisome: 23257241

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G170300.1	Wheat	mitochondrion	84.92	89.54
EER94889	Sorghum	mitochondrion	85.95	89.46
TraesCS4A01G137000.1	Wheat	mitochondrion	84.5	89.11
TraesCS4B01G167100.1	Wheat	mitochondrion	84.09	88.67
Zm00001d029083_P001	Maize	extracellular	80.58	86.28
Os05t0475400-02	Rice	peroxisome	67.77	83.89
GSMUA_Achr6P32610_001	Banana	mitochondrion	75.83	77.1
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	73.55	74.63
VIT_06s0004g07660.t01	Wine grape	mitochondrion	73.14	74.06
KRH76075	Soybean	mitochondrion	71.49	72.84
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	71.9	72.8
CDY61533	Canola	peroxisome	28.1	72.73
Solyc10g076250.1.1	Tomato	mitochondrion	71.69	72.59
KRH65497	Soybean	mitochondrion	70.25	71.58
KRH00394	Soybean	mitochondrion	71.28	71.58
AT3G08860.1	Thale cress	mitochondrion	70.45	70.89
CDY14465	Canola	cytosol	61.57	70.12
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	66.12	69.87
CDY00650	Canola	mitochondrion	67.77	69.79
CDX73944	Canola	mitochondrion	67.56	69.57
CDY00651	Canola	mitochondrion	67.36	69.36
CDY54458	Canola	mitochondrion	66.53	67.93
Bra000060.1-P	Field mustard	mitochondrion	66.53	67.65
Bra005111.1-P	Field mustard	mitochondrion	66.12	67.51
Bra017119.1-P	Field mustard	mitochondrion	66.12	66.81
CDY61531	Canola	mitochondrion	28.93	66.67
CDY54421	Canola	mitochondrion	65.7	66.11
CDY66720	Canola	mitochondrion	66.94	65.85
CDY18386	Canola	mitochondrion	31.41	65.24
AT2G38400.2	Thale cress	mitochondrion	66.32	65.11
CDY71561	Canola	mitochondrion	27.89	60.81
Os03t0171900-01	Rice	mitochondrion	60.12	59.88
Os05t0129100-00	Rice	plastid	19.42	28.83
Os07t0461900-01	Rice	plastid	19.42	28.66
Os03t0643300-02	Rice	mitochondrion	24.59	25.16
Os02t0112900-00	Rice	cytosol	23.55	23.6
Os08t0532200-01	Rice	plastid	22.31	22.59
Os04t0614500-01	Rice	plastid	22.93	22.33
Os04t0614600-01	Rice	mitochondrion	23.55	22.09
Os08t0205900-01	Rice	mitochondrion	21.69	20.59

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	UniProt:A0A0P0VX85	InterPro:Aminotrans_3	ProteinID:BAS84100.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008453	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	GO:GO:0042802	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlantsGene:Os03g0338000	EnsemblPlants:Os03t0338000-01
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000393A270	SEG:seg	:

Description

Similar to alanine--glyoxylate aminotransferase 2. (Os03t0338000-01)

Coordinates

chr3:-:12556849..12559702

Molecular Weight (calculated)

51952.6 Da

IEP (calculated)

6.911

GRAVY (calculated)

0.070

Length

484 amino acids

Sequence
(BLAST)

001: DRGGGTDCGF LELLGWVVVM MMQGGRIARR GLSRLAAAVE TAAVAPPRMA DFNHVPLPYD GPSAAEIARK RAEFLSPSLF HFYSKPLNIV EGKMQYLFDE
101: RGRRYLDAFA GIATVCCGHC HPDVVGAIAA QAGRLQHSTV LYLNHAIADF AEALASKMPG DLKVVFFTNS GTEANELAIM MARLYTGSHD IISLRNSYHG
201: NAAGTMGATA QKNWKFSVVQ SGVHHAVNPD PYRGAFGSDA EKYARDVQEI IEFGTTGQVA GFISEAIQGV GGIVELSPGY LPLAYEAVRS AGGLCIADEV
301: QAGFARVGSH FWGFETHGVV PDIVTMAKGI GNGIPLGAVV TTPEIAQVLT RRCYFNTFGG NPLCTAGGLA VLRVLEKEGL QANAHAVGSY LKDRLRALQD
401: KHEIIGDVRG TGFMLGVELV TDRQLKTPAK DEICRAMEHM KEMGVLVGKG GFYGNVFRIT PPLCFTKEDA DFFVAVMDSA LSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.