Factsheet for GSMUA_Achr6P32610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P08560_001	Banana	peroxisome	78.15	85.32
GSMUA_Achr8P17090_001	Banana	peroxisome	75.21	80.09
EER94889	Sorghum	mitochondrion	76.26	78.06
TraesCS4D01G170300.1	Wheat	mitochondrion	74.58	77.34
TraesCS4A01G137000.1	Wheat	mitochondrion	74.16	76.91
TraesCS4B01G167100.1	Wheat	mitochondrion	73.74	76.47
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	76.26	76.1
Os03t0338000-01	Rice	peroxisome	77.1	75.83
CDY61533	Canola	peroxisome	29.41	74.87
Zm00001d029083_P001	Maize	extracellular	70.8	74.56
KRH76075	Soybean	mitochondrion	74.37	74.53
KRH65497	Soybean	mitochondrion	73.95	74.11
Solyc10g076250.1.1	Tomato	mitochondrion	74.16	73.85
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	73.95	73.64
VIT_06s0004g07660.t01	Wine grape	mitochondrion	73.74	73.43
KRH00394	Soybean	mitochondrion	72.69	71.78
CDY14465	Canola	cytosol	64.08	71.76
AT3G08860.1	Thale cress	mitochondrion	71.01	70.27
Bra017119.1-P	Field mustard	mitochondrion	70.38	69.94
Bra000060.1-P	Field mustard	mitochondrion	69.75	69.75
CDY54421	Canola	mitochondrion	70.38	69.65
CDY54458	Canola	mitochondrion	69.33	69.62
CDY18386	Canola	mitochondrion	34.03	69.53
CDX73944	Canola	mitochondrion	68.49	69.36
CDY00650	Canola	mitochondrion	68.49	69.36
Bra005111.1-P	Field mustard	mitochondrion	68.91	69.2
CDY00651	Canola	mitochondrion	68.07	68.94
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	66.18	68.78
CDY66720	Canola	mitochondrion	70.38	68.09
GSMUA_Achr1P17230_001	Banana	peroxisome	32.14	67.7
AT2G38400.2	Thale cress	mitochondrion	69.96	67.55
GSMUA_Achr10P...	Banana	peroxisome	59.45	67.06
CDY61531	Canola	mitochondrion	29.41	66.67
CDY71561	Canola	mitochondrion	27.52	59.01
GSMUA_Achr9P04450_001	Banana	cytosol	26.89	31.92
GSMUA_Achr11P...	Banana	cytosol	23.53	30.52
GSMUA_Achr5P28220_001	Banana	cytosol	14.29	27.98
GSMUA_Achr10P...	Banana	mitochondrion	25.0	25.11
GSMUA_Achr6P07940_001	Banana	plastid	23.11	23.21
GSMUA_Achr5P00340_001	Banana	mitochondrion	22.48	21.19

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr6G32610_001	EnsemblPlants:GSMUA_Achr6P32610_001
EnsemblPlants:GSMUA_Achr6T32610_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0TC55	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0002953D5D	:	:	:	:

Description

Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G32610_001]

Coordinates

chr6:+:31947701..31950541

Molecular Weight (calculated)

51783.2 Da

IEP (calculated)

7.821

GRAVY (calculated)

-0.099

Length

476 amino acids

Sequence
(BLAST)

001: MQRLLVRRLS SVATQGRRGC SSSRSTAAEI NGGADAVVPE IPPFDYAPPR YDGPRAAEIL RKRSEYLSPS MFYFYKKPLN IVDGKMQYLF DQDGRRYLDA
101: FAGIATVCCG HCHPDVVDAV VRQTSHLQHS TVVYLNHAIA DFAEALASKL PGDLKVVFFT NSGTEANELA LLITRLYTGC HDIVSVRNAY HGNAAGTMGT
201: TAQYNWKFNV MQSGVHHAMN PDPYRGAFGS DGEKYARDVQ EIIEFGTSGQ VAGFISESIQ GVGGVVELAP GYLPAVYESI RKAGGLCIAD EVQSGFARTG
301: SHFWGFEAHG IVPDIVTMAK GIGNGIPLGA VVTTPEIAQV LTRRNYFNTF GGNPVCTAGG LAVLRVLEKE NLQHNALLVG SYLKGRLKAL QQKHEIIGDV
401: RGRGMMLGVE LVTDRKQKTP ARTEISHAMD QMKDMGVLVG KGGFYGNVFR ITPPLCFTKE DADFFTEVMD IALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.