Factsheet for Bra001341.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 2
mitochondrion 6
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71561	Canola	mitochondrion	46.72	96.4
CDX73944	Canola	mitochondrion	98.03	95.53
AT3G08860.1	Thale cress	mitochondrion	90.39	86.07
GSMUA_Achr5P08560_001	Banana	peroxisome	69.43	72.94
Os05t0475400-02	Rice	peroxisome	61.35	71.87
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	72.93	70.02
TraesCS4B01G167100.1	Wheat	mitochondrion	69.65	69.5
TraesCS4D01G170300.1	Wheat	mitochondrion	69.21	69.06
TraesCS4A01G137000.1	Wheat	mitochondrion	69.0	68.85
EES19688	Sorghum	mitochondrion	71.62	68.48
Zm00001d038460_P007	Maize	plasma membrane	70.09	68.44
KRH65497	Soybean	mitochondrion	70.74	68.21
GSMUA_Achr8P17090_001	Banana	peroxisome	66.38	68.01
KRH76075	Soybean	mitochondrion	70.52	68.0
EER94889	Sorghum	mitochondrion	69.0	67.96
TraesCS1D01G292100.1	Wheat	mitochondrion	70.52	67.71
TraesCS1B01G308900.1	Wheat	mitochondrion	70.52	67.71
TraesCS1A01G299100.1	Wheat	mitochondrion	70.31	67.51
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	70.31	67.36
KRH00394	Soybean	mitochondrion	70.52	67.01
VIT_06s0004g07660.t01	Wine grape	mitochondrion	69.87	66.95
Solyc10g076250.1.1	Tomato	mitochondrion	69.43	66.53
GSMUA_Achr6P32610_001	Banana	mitochondrion	68.78	66.18
Os03t0338000-01	Rice	peroxisome	69.87	66.12
Bra005111.1-P	Field mustard	mitochondrion	67.69	65.4
Bra000060.1-P	Field mustard	mitochondrion	67.9	65.34
Bra017119.1-P	Field mustard	mitochondrion	68.12	65.14
Zm00001d038453_P003	Maize	mitochondrion	70.96	63.85
HORVU1Hr1G070220.2	Barley	mitochondrion	68.78	63.77
Zm00001d029083_P001	Maize	extracellular	62.88	63.72
Zm00001d043951_P001	Maize	cytosol	27.73	57.99
Bra011843.1-P	Field mustard	mitochondrion	59.61	57.35
GSMUA_Achr1P17230_001	Banana	peroxisome	28.17	57.08
Bra010671.1-P	Field mustard	mitochondrion	58.08	30.23
Bra008453.1-P	Field mustard	plastid	24.02	24.55
Bra035168.1-P	Field mustard	mitochondrion	23.8	24.17
Bra017570.1-P	Field mustard	mitochondrion	14.85	23.45
Bra025033.1-P	Field mustard	mitochondrion	23.8	22.85
Bra023845.1-P	Field mustard	mitochondrion	22.49	20.56
Bra031332.1-P	Field mustard	mitochondrion	21.83	20.0
Bra031335.1-P	Field mustard	mitochondrion	21.83	19.92
Bra035836.1-P	Field mustard	plastid	19.87	19.24
Bra038646.1-P	Field mustard	plastid	19.87	19.24
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	17.9	16.77
Bra031334.1-P	Field mustard	cytosol	7.21	15.64

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.2.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra001341	EnsemblPlants:Bra001341.1
EnsemblPlants:Bra001341.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007154	GO:GO:0008150
GO:GO:0008483	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016740	GO:GO:0030170
GO:GO:0043562	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4CAW2	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000254061B	SEG:seg	:	:	:

Description

AT3G08860 (E=2e-115) | alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative

Coordinates

chrA03:+:15921763..15924871

Molecular Weight (calculated)

50233.5 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.088

Length

458 amino acids

Sequence
(BLAST)

001: MRMLTTAVNT LLKRENSFLQ RHGFAHVVAQ RTNSVHQTET KAPKIPPFSY SPPPYDGPST AEIIAKRREF LSPALFHFYN TPLNIVEGKK QYVFDETGRR
101: YLDAFGGIAT VSCGHSHPEV VESVIKQLKL IQHSTTLYLN HTISDFAEAL VSTLPGDLKV VFFTNSGTEA NELAMMMARL YTGCNDVVSL RNSYHGNAAA
201: TMGATAQSNW KFNVVQSGVH HAINPDPYRG IFGSDGEKYA REGVGGIVEL APGYLPVAYD IVRRAGGVCI ADEVQSGFAR TGTHFWGFQS HGVIPDIVTM
301: AKGIGNGIPL GAVVTTPEIA GVLSRRFYFN TFGGNPMCTA AGHAVLRVIR EEKLQENALF VGSHLTRKLT QLKDKYELIG DVRGRGLMLG VEFVTDRDLK
401: TPAKSETLHL MDQMKEMGVL VGKGGFYGNV FRITPPLCFT LPDADFLVDV MDHALSKM

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.