Factsheet for Solyc10g076250.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	96.86	96.86
GSMUA_Achr5P08560_001	Banana	peroxisome	73.22	80.28
Os05t0475400-02	Rice	peroxisome	64.85	79.28
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	77.82	77.99
CDY61533	Canola	peroxisome	29.92	76.47
VIT_06s0004g07660.t01	Wine grape	mitochondrion	76.15	76.15
GSMUA_Achr8P17090_001	Banana	peroxisome	70.92	75.84
KRH76075	Soybean	mitochondrion	74.48	74.95
GSMUA_Achr6P32610_001	Banana	mitochondrion	73.85	74.16
Zm00001d038460_P007	Maize	plasma membrane	72.59	73.99
EES19688	Sorghum	mitochondrion	74.06	73.9
KRH65497	Soybean	mitochondrion	73.22	73.68
TraesCS4A01G137000.1	Wheat	mitochondrion	70.71	73.64
TraesCS4D01G170300.1	Wheat	mitochondrion	70.5	73.42
TraesCS1D01G292100.1	Wheat	mitochondrion	73.22	73.38
TraesCS1B01G308900.1	Wheat	mitochondrion	73.22	73.38
TraesCS1A01G299100.1	Wheat	mitochondrion	73.01	73.17
TraesCS4B01G167100.1	Wheat	mitochondrion	70.08	72.98
EER94889	Sorghum	mitochondrion	70.92	72.9
AT3G08860.1	Thale cress	mitochondrion	72.59	72.14
CDY14465	Canola	cytosol	63.81	71.76
Os03t0338000-01	Rice	peroxisome	72.59	71.69
KRH00394	Soybean	mitochondrion	72.18	71.58
CDY18386	Canola	mitochondrion	34.52	70.82
Bra017119.1-P	Field mustard	mitochondrion	70.92	70.77
CDY00650	Canola	mitochondrion	69.46	70.64
Bra000060.1-P	Field mustard	mitochondrion	70.29	70.59
CDY54458	Canola	mitochondrion	69.87	70.46
CDX73944	Canola	mitochondrion	69.25	70.43
CDY00651	Canola	mitochondrion	69.04	70.21
AT2G38400.2	Thale cress	mitochondrion	72.38	70.18
Bra005111.1-P	Field mustard	mitochondrion	69.46	70.04
CDY54421	Canola	mitochondrion	69.87	69.44
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	66.53	69.43
HORVU1Hr1G070220.2	Barley	mitochondrion	71.34	69.03
Zm00001d029083_P001	Maize	extracellular	65.27	69.03
CDY66720	Canola	mitochondrion	70.92	68.9
Zm00001d038453_P003	Maize	mitochondrion	73.22	68.76
CDY61531	Canola	mitochondrion	29.5	67.14
CDY71561	Canola	mitochondrion	28.24	60.81
Zm00001d043951_P001	Maize	cytosol	27.62	60.27
Solyc04g054310.2.1	Tomato	extracellular, plastid	59.62	60.25
GSMUA_Achr1P17230_001	Banana	peroxisome	28.45	60.18
Solyc08g080370.2.1	Tomato	plastid	28.03	29.13
Solyc08g048450.2.1	Tomato	cytosol, plastid	23.85	26.82
Solyc12g006470.1.1	Tomato	extracellular, nucleus	23.43	24.45
Solyc08g014610.2.1	Tomato	cytosol	23.22	24.24
Solyc12g006450.1.1	Tomato	plastid	23.85	22.09
Solyc07g043310.2.1	Tomato	nucleus	23.43	21.75
Solyc04g009200.2.1	Tomato	plastid	21.55	21.37

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0007154	GO:GO:0008150	GO:GO:0008453	GO:GO:0008483	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	GO:GO:0043562
InterPro:IPR015421	InterPro:IPR015422	UniProt:K4D1W7	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600
PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
EnsemblPlantsGene:Solyc10g076250.1	EnsemblPlants:Solyc10g076250.1.1	UniParc:UPI0002769BFB	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:+:59150218..59154032

Molecular Weight (calculated)

52220.9 Da

IEP (calculated)

7.387

GRAVY (calculated)

-0.082

Length

478 amino acids

Sequence
(BLAST)

001: MQRLVVTRAK WVGELRGLSQ RCYSQLGLAS QKEDDLIINP QMPHFDYSPP PYNGPSADEI LSKRKEFLSP SMFYFYEKNP LHLVHGKMQY LFDSNGRRYL
101: DAFGGIATVS CGHCHPDVVE AIVNQTKRLQ HSTILYLNNA ITDFAEALAS KLPGDLKVVF FTNSGTEANE LAIMMARLYT GCHDIISLRN AYHGNAAATM
201: STTGQSVWKF NVVQSGVHHA INPDPYRGVF GSDGEKYAKD VEDLIQFGTS GRVAAFMSEA IQGVGGIVEL APGYLPAAYN AVRKAGGLCI ADEVQSGFAR
301: TGSQFWGFEN QGVVPDIVTM AKGIGNGIPL GAVVTTPEIA EVLCHSNYFN TFGGNPVCTS AGLAVLRVIE KENLQQNAHF VGSYLKERLM AIKNKHEIVG
401: DVRGRGLLLG VELVTDRKLK TPAKAETLHI MNHMKDMGVL VGKGGFRGNV FRITPPLCFT KEDADFVADV MDCAMSKI

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.