CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71561	Canola	mitochondrion	46.6	98.65
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	95.53	98.03
CDY00650	Canola	mitochondrion	97.45	97.45
CDY00651	Canola	mitochondrion	97.45	97.45
AT3G08860.1	Thale cress	mitochondrion	91.91	89.81
CDY61533	Canola	peroxisome	30.21	75.94
GSMUA_Achr5P08560_001	Banana	peroxisome	69.36	74.77
Os05t0475400-02	Rice	peroxisome	61.49	73.91
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	73.62	72.54
TraesCS4B01G167100.1	Wheat	mitochondrion	69.36	71.02
TraesCS4D01G170300.1	Wheat	mitochondrion	68.94	70.59
TraesCS4A01G137000.1	Wheat	mitochondrion	68.72	70.37
KRH76075	Soybean	mitochondrion	70.85	70.11
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	71.28	70.08
GSMUA_Achr8P17090_001	Banana	peroxisome	66.6	70.02
EES19688	Sorghum	mitochondrion	71.28	69.94
KRH65497	Soybean	mitochondrion	70.64	69.89
Zm00001d038460_P007	Maize	plasma membrane	69.57	69.72
CDY14465	Canola	cytosol	62.77	69.41
EER94889	Sorghum	mitochondrion	68.51	69.25
Solyc10g076250.1.1	Tomato	mitochondrion	70.43	69.25
VIT_06s0004g07660.t01	Wine grape	mitochondrion	70.21	69.04
TraesCS1B01G308900.1	Wheat	mitochondrion	69.79	68.76
TraesCS1D01G292100.1	Wheat	mitochondrion	69.79	68.76
KRH00394	Soybean	mitochondrion	70.43	68.67
TraesCS1A01G299100.1	Wheat	mitochondrion	69.57	68.55
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.36	68.49
CDY54458	Canola	mitochondrion	68.51	67.93
CDY54421	Canola	mitochondrion	69.15	67.57
Os03t0338000-01	Rice	peroxisome	69.57	67.56
CDY18386	Canola	mitochondrion	33.4	67.38
CDY66720	Canola	mitochondrion	68.94	65.85
Zm00001d029083_P001	Maize	extracellular	62.77	65.27
Zm00001d038453_P003	Maize	mitochondrion	70.43	65.03
HORVU1Hr1G070220.2	Barley	mitochondrion	67.66	64.37
CDY61531	Canola	mitochondrion	28.72	64.29
GSMUA_Achr1P17230_001	Banana	peroxisome	28.51	59.29
CDY41995	Canola	mitochondrion	60.0	59.24
CDX90347	Canola	mitochondrion	59.79	59.03
CDY63451	Canola	mitochondrion	59.57	58.82
CDY42643	Canola	mitochondrion	59.57	58.82
Zm00001d043951_P001	Maize	cytosol	27.02	57.99
CDY67620	Canola	mitochondrion, plastid	24.68	25.89
CDY37615	Canola	mitochondrion	24.68	25.89
CDY39963	Canola	mitochondrion	24.47	25.5
CDX87325	Canola	mitochondrion	24.26	25.28
CDX77642	Canola	mitochondrion	21.7	23.94
CDY33459	Canola	mitochondrion	21.28	23.42
CDY35151	Canola	mitochondrion	18.51	22.83
CDY58748	Canola	mitochondrion	22.77	21.49
CDY37389	Canola	mitochondrion	22.34	21.0
CDY10622	Canola	golgi	21.06	20.97
CDY39506	Canola	mitochondrion	22.55	20.95
CDY10619	Canola	mitochondrion	22.13	20.8
CDX81186	Canola	plastid	20.21	20.08
CDY41519	Canola	plastid	20.0	19.87
CDY16715	Canola	plastid	20.0	19.87
CDY62883	Canola	plastid	20.0	19.87
CDY68670	Canola	cytosol	18.51	19.51
CDY03236	Canola	cytosol	15.74	19.22
CDY10621	Canola	extracellular, plastid	8.51	16.95

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078CCK7	InterPro:Aminotrans_3	EnsemblPlants:CDX73944
ProteinID:CDX73944	ProteinID:CDX73944.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00111672001	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EE4124	SEG:seg	:	:

Description

BnaA03g31030D

Coordinates

chrLK031800:-:647396..651557

Molecular Weight (calculated)

51563.1 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.101

Length

470 amino acids

Sequence
(BLAST)

001: MRMLTTAVNT LLKRENYLLQ RHGFAQTVAQ RTNSVHQTET KVPKIPPFSY SPPPYDGPST AEIIAKRREF LSPALFHFYN TPLNIVEGKK QYVFDETGRR
101: YLDAFGGIAT VSCGHSHPEV VESVIKQLKL IQHSTTLYLN HTISDFAEAL VSTLPGDLKV VFFTNSGTEA NELAMMMARL YTGCNDVVSL RNSYHGNAAA
201: TMGATAQSNW KFNVVQSGVH HAINPDPYRG IFGSDGEKYA RDVHDLIQFG TSGQGVGGIV ELAPGYLRAA YDIVRRAGGV CIADEVQSGF ARTGTHFWGF
301: QSHGVIPDIV TMAKGIGNGI PLGAVVTTPE IAGVLSRRFY FNTFGGNPMC TAAGHAVLRV IREEKLQENA LLVGSHLTRK LTQLKDKYEL IGDVRGRGLM
401: LGVEFVTDRD LKTPAKSETL HLMDQMKEMG VLVGKGGFYG NVFRITPPLC FTLPDADFLV DVMDHALSKM

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.