CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61533	Canola	peroxisome	66.09	82.35
CDY54421	Canola	mitochondrion	95.28	46.15
GSMUA_Achr1P17230_001	Banana	peroxisome	42.92	44.25
CDY54458	Canola	mitochondrion	89.7	44.09
Bra005111.1-P	Field mustard	mitochondrion	88.84	43.67
CDY14465	Canola	cytosol	78.54	43.06
CDY66720	Canola	mitochondrion	87.55	41.46
AT2G38400.2	Thale cress	mitochondrion	82.83	39.15
Os05t0475400-02	Rice	peroxisome	62.23	37.08
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	73.39	35.85
VIT_06s0004g07660.t01	Wine grape	mitochondrion	73.39	35.77
KRH76075	Soybean	mitochondrion	70.39	34.53
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	70.82	34.52
Solyc10g076250.1.1	Tomato	mitochondrion	70.82	34.52
KRH00394	Soybean	mitochondrion	71.24	34.44
GSMUA_Achr5P08560_001	Banana	peroxisome	64.38	34.4
KRH65497	Soybean	mitochondrion	69.53	34.11
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.53	34.03
CDY00650	Canola	mitochondrion	67.81	33.62
CDY00651	Canola	mitochondrion	67.81	33.62
CDX73944	Canola	mitochondrion	67.38	33.4
GSMUA_Achr8P17090_001	Banana	peroxisome	63.95	33.33
EER94889	Sorghum	mitochondrion	65.67	32.9
TraesCS1D01G292100.1	Wheat	mitochondrion	66.52	32.49
EES19688	Sorghum	mitochondrion	66.52	32.36
TraesCS1A01G299100.1	Wheat	mitochondrion	66.09	32.29
TraesCS1B01G308900.1	Wheat	mitochondrion	66.09	32.29
TraesCS4D01G170300.1	Wheat	mitochondrion	63.52	32.24
TraesCS4B01G167100.1	Wheat	mitochondrion	63.52	32.24
TraesCS4A01G137000.1	Wheat	mitochondrion	63.52	32.24
Os03t0338000-01	Rice	peroxisome	65.24	31.41
Zm00001d038460_P007	Maize	plasma membrane	63.09	31.34
HORVU1Hr1G070220.2	Barley	mitochondrion	63.52	29.96
Zm00001d038453_P003	Maize	mitochondrion	64.81	29.67
CDY63451	Canola	mitochondrion	60.52	29.62
CDY42643	Canola	mitochondrion	60.52	29.62
CDX90347	Canola	mitochondrion	60.52	29.62
CDY41995	Canola	mitochondrion	59.23	28.99
Zm00001d029083_P001	Maize	extracellular	55.36	28.54
CDX77642	Canola	mitochondrion	28.76	15.73
CDY33459	Canola	mitochondrion	28.33	15.46
CDY67620	Canola	mitochondrion, plastid	27.9	14.51
CDY37615	Canola	mitochondrion	27.9	14.51
CDX87325	Canola	mitochondrion	27.9	14.41
CDY03236	Canola	cytosol	23.61	14.29
CDY39963	Canola	mitochondrion	27.47	14.19
CDY10621	Canola	extracellular, plastid	13.73	13.56
CDY68670	Canola	cytosol	24.46	12.78
CDY35151	Canola	mitochondrion	20.17	12.34
CDY58748	Canola	mitochondrion	26.18	12.25
CDY37389	Canola	mitochondrion	26.18	12.2
CDY10619	Canola	mitochondrion	26.18	12.2
CDY39506	Canola	mitochondrion	26.18	12.06
CDY10622	Canola	golgi	23.18	11.44
CDY41519	Canola	plastid	20.17	9.94
CDY62883	Canola	plastid	20.17	9.94
CDY16715	Canola	plastid	19.74	9.73
CDX81186	Canola	plastid	19.74	9.73
Zm00001d043951_P001	Maize	cytosol	8.58	9.13
CDY61531	Canola	mitochondrion	3.86	4.29
CDY71561	Canola	mitochondrion	3.86	4.05

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.2.6	GO:A0A078FZA4	UniProt:A0A078FZA4	InterPro:Aminotrans_3
EnsemblPlants:CDY18386	ProteinID:CDY18386	ProteinID:CDY18386.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00005374001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EEB9C8	SEG:seg	:	:

Description

BnaA04g22010DBnaA04g22010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZA4]

Coordinates

chrLK032085:-:167336..168288

Molecular Weight (calculated)

25313.7 Da

IEP (calculated)

8.320

GRAVY (calculated)

-0.004

Length

233 amino acids

Sequence
(BLAST)

001: MQRLTAKRTV HNVSLSLSRR CISSCTSQTY VDAAYDIVKK AGGLFIADEV QSGFARTGDF WGFEAHNVVP DIVTMAKGIG NGFPLGAVVT TPEIAGVLTR
101: RCYFNTFGGN AVAATAGLAV LDVIEKDNLQ ENASMVGSYL KGRLSQLKEK HEIIGDVRGR GLMLGVELVS DRKLKTPATA ETLHIMNQMK ELGVLVGKGG
201: HFGNVFRITP PLCFTKEDAD YLVETMDYSM SRM

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.