Factsheet for Bra005111.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54458	Canola	mitochondrion	98.73	98.73
CDY61531	Canola	mitochondrion	42.62	96.19
CDY61533	Canola	peroxisome	37.55	95.19
CDY18386	Canola	mitochondrion	43.67	88.84
Bra017119.1-P	Field mustard	mitochondrion	87.97	87.06
Bra000060.1-P	Field mustard	mitochondrion	87.13	86.76
AT2G38400.2	Thale cress	mitochondrion	86.29	82.96
GSMUA_Achr5P08560_001	Banana	peroxisome	69.2	75.23
Os05t0475400-02	Rice	peroxisome	61.81	74.94
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	74.68	74.21
VIT_06s0004g07660.t01	Wine grape	mitochondrion	71.94	71.34
GSMUA_Achr8P17090_001	Banana	peroxisome	66.88	70.92
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	70.89	70.29
Solyc10g076250.1.1	Tomato	mitochondrion	70.04	69.46
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.2	68.91
KRH76075	Soybean	mitochondrion	68.99	68.84
EER94889	Sorghum	mitochondrion	67.51	68.82
EES19688	Sorghum	mitochondrion	69.2	68.48
TraesCS1D01G292100.1	Wheat	mitochondrion	68.78	68.34
TraesCS4A01G137000.1	Wheat	mitochondrion	66.03	68.19
TraesCS4B01G167100.1	Wheat	mitochondrion	66.03	68.19
TraesCS1B01G308900.1	Wheat	mitochondrion	68.57	68.13
TraesCS4D01G170300.1	Wheat	mitochondrion	65.82	67.97
KRH65497	Soybean	mitochondrion	67.93	67.79
TraesCS1A01G299100.1	Wheat	mitochondrion	68.14	67.71
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	65.4	67.69
KRH00394	Soybean	mitochondrion	68.57	67.43
Zm00001d038460_P007	Maize	plasma membrane	66.46	67.16
Os03t0338000-01	Rice	peroxisome	67.51	66.12
Zm00001d029083_P001	Maize	extracellular	62.24	65.27
HORVU1Hr1G070220.2	Barley	mitochondrion	67.3	64.57
Zm00001d038453_P003	Maize	mitochondrion	68.14	63.46
Bra011843.1-P	Field mustard	mitochondrion	58.86	58.61
Zm00001d043951_P001	Maize	cytosol	26.37	57.08
GSMUA_Achr1P17230_001	Banana	peroxisome	27.0	56.64
Bra010671.1-P	Field mustard	mitochondrion	58.86	31.7
Bra008453.1-P	Field mustard	plastid	25.74	27.23
Bra035168.1-P	Field mustard	mitochondrion	25.53	26.83
Bra025033.1-P	Field mustard	mitochondrion	25.95	25.79
Bra017570.1-P	Field mustard	mitochondrion	15.19	24.83
Bra023845.1-P	Field mustard	mitochondrion	23.42	22.16
Bra031332.1-P	Field mustard	mitochondrion	23.21	22.0
Bra031335.1-P	Field mustard	mitochondrion	22.15	20.92
Bra031334.1-P	Field mustard	cytosol	9.07	20.38
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	20.68	20.04
Bra038646.1-P	Field mustard	plastid	19.83	19.87
Bra035836.1-P	Field mustard	plastid	19.41	19.45

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra005111	EnsemblPlants:Bra005111.1
EnsemblPlants:Bra005111.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4CLM4	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI00025476B8	SEG:seg	:	:	:

Description

AT2G38400 (E=8e-236) AGT3 | AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA05:-:3478234..3480554

Molecular Weight (calculated)

51756.4 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.052

Length

474 amino acids

Sequence
(BLAST)

001: MQRFSAKSTF QNIPISLLRR CISSTSQTAM AASDEFLGRL PPFEYIPPPY TGPSADVILN QRKEFLSSYT SCLYKKPLNI VDGKMQYLFD ESGRRYLDAF
101: AGIAVVNCGH CHPHVVKPVI DQIKRLQHPT TLYLNHAIAD FSEALASKLP GDLKVVFFTN SGTEANELAL MMAKLYTGYQ DIVSIRNGYH GNAAGTMGAT
201: GQSMWKFNVV QTGTHHALNP DPYRGVFGSD GEKYARELHD LIQYGTTGHI AGFVFEAIQG VGGIVELAPG YLSAAYDIVK KAGGLFIADE VQSGFTRTGD
301: FWGFEAHNVV PDIVTMAKGI GNGFPLGAVV TTPEIARVLT RRCYFNTFGG NAVATTAGLA VLNVIEKDKL QENASMVGSY LKGRLDQLKE KHEIIGDVRG
401: RGLMLGVELV SDRKLKTPAT AETLHIMDQM KELGVLVGKG GFFGNVFKIT PPLCFTKDDA DYLVEAMDYS VSKM

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.