Factsheet for Bra038646.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63570.1	Bra024839.1-P	AT2G01950.1	19000166
AT5G63570.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41519	Canola	plastid	99.79	99.79
Bra035836.1-P	Field mustard	plastid	97.25	97.25
AT5G63570.1	Thale cress	plastid	96.62	96.41
PGSC0003DMT400082447	Potato	cytosol	82.88	81.5
Solyc04g009200.2.1	Tomato	plastid	82.66	81.12
VIT_17s0000g00900.t01	Wine grape	plastid	80.97	80.97
KRH51376	Soybean	plastid	77.38	78.54
KXG22248	Sorghum	plastid	78.01	78.01
KRH60678	Soybean	nucleus	77.38	77.87
Zm00001d038547_P001	Maize	plastid	77.59	77.43
TraesCS7D01G261800.1	Wheat	plastid	76.96	77.12
TraesCS7A01G260800.2	Wheat	plastid	76.96	77.12
TraesCS7B01G158800.1	Wheat	plastid	75.9	76.06
GSMUA_Achr6P07940_001	Banana	plastid	76.11	75.95
Os08t0532200-01	Rice	plastid	76.74	75.94
TraesCS7D01G262000.1	Wheat	mitochondrion	51.59	73.49
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	76.32	70.37
HORVU7Hr1G054360.1	Barley	plastid	30.23	67.77
Bra035168.1-P	Field mustard	mitochondrion	21.35	22.39
Bra025033.1-P	Field mustard	mitochondrion	22.2	22.01
Bra008453.1-P	Field mustard	plastid	20.72	21.88
Bra017570.1-P	Field mustard	mitochondrion	13.11	21.38
Bra011843.1-P	Field mustard	mitochondrion	20.72	20.59
Bra000060.1-P	Field mustard	mitochondrion	20.51	20.38
Bra017119.1-P	Field mustard	mitochondrion	20.51	20.25
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	19.24	19.87
Bra005111.1-P	Field mustard	mitochondrion	19.87	19.83
Bra023845.1-P	Field mustard	mitochondrion	20.51	19.36
Bra031332.1-P	Field mustard	mitochondrion	19.03	18.0
Bra031335.1-P	Field mustard	mitochondrion	17.97	16.93
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	16.28	15.75
Bra031334.1-P	Field mustard	cytosol	6.98	15.64
Bra010671.1-P	Field mustard	mitochondrion	19.87	10.68

Protein Annotations

KEGG:00860+5.4.3.8	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:4pyrrol_synth_GluAld_NH2Trfase	MapMan:7.12.1.4	InterPro:Aminotrans_3
EnsemblPlantsGene:Bra038646	EnsemblPlants:Bra038646.1	EnsemblPlants:Bra038646.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	GO:GO:0033014	GO:GO:0042286	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4FC30
HAMAP:MF_00375	PFAM:PF00202	ScanProsite:PS00600	PANTHER:PTHR43713	PANTHER:PTHR43713:SF2	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00713	UniParc:UPI000253F2BA	SEG:seg

Description

AT5G63570 (E=3e-244) GSA1 | GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE); glutamate-1-semialdehyde 2,1-aminomutase

Coordinates

chrA06:+:14371120..14372921

Molecular Weight (calculated)

50224.5 Da

IEP (calculated)

7.151

GRAVY (calculated)

0.015

Length

473 amino acids

Sequence
(BLAST)

001: MSATLTGSGT ALGFSCSSKI SKRVSSSPST RCSIKMSVSV DEKKKSFTLQ KSEEAFNAAK NLMPGGVNSP VRAFKSVGGQ PVLIDSVKGS KMWDIDGNVY
101: IDYVGSWGPA IIGHADDEVL AALAETMKKG TSFGAPCLLE NVLAEMVISA VPSIEMVRFV NSGTEACMGV LRLARAFTNK EKFIKFEGCY HGHANAFLVK
201: AGSGVATLGL PDSPGVPKAA TSDTLTAPYN DIEAVAKLFE AHKGEISAVI LEPVVGNSGF ITPTPEFING LRQLTKDNGA LLIFDEVMTG FRLAYGGAQE
301: YFGITPDLTT LGKIIGGGLP VGAYGGRRDI MEMVAPAGPM YQAGTLSGNP LAMTAGIHTL KRLKQPGTYE YLDKITKELT NGILEAGKKT GHPMCGGYIS
401: GMFGFFFAEG PVYNFADAKK SDTEKFGKFF RGMLEEGVYF APSQFEAGFT SLAHTSEDIQ FTISAAERVL GRI

Best Arabidopsis Sequence Match ( AT5G63570.1 )
(BLAST)

001: MSATLTGSGT ALGFSCSSKI SKRVSSSPAS NRCCIKMSVS VDEKKKSFSL QKSEEAFNAA KNLMPGGVNS PVRAFKSVGG QPVLIDSVKG SKMWDIDGNE
101: YIDYVGSWGP AIIGHADDEV LAALAETMKK GTSFGAPCLL ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTN KEKFIKFEGC YHGHANAFLV
201: KAGSGVATLG LPDSPGVPKA ATSDTLTAPY NDLEAVEKLF AAHKGEISAV ILEPVVGNSG FIPPTPEFIN GLRQLTKDNG VLLIFDEVMT GFRLAYGGAQ
301: EYFGITPDLT TLGKIIGGGL PVGAYGGRRD IMEMVAPAGP MYQAGTLSGN PLAMTAGIHT LKRLKQAGTY EYLDKITKEL TNGILEAGKK TGHPMCGGYI
401: SGMFGFFFAE GPVYNFADSK KSDTEKFGRF FRGMLEEGVY FAPSQFEAGF TSLAHTPEDI QLTIAAAERV LSRI

Arabidopsis Description

GSA1Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42799]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.