Factsheet for Bra010671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90347	Canola	mitochondrion	52.73	97.48
CDY63451	Canola	mitochondrion	52.27	96.64
Bra011843.1-P	Field mustard	mitochondrion	50.23	92.86
AT4G39660.1	Thale cress	mitochondrion	48.3	89.29
GSMUA_Achr10P...	Banana	peroxisome	38.86	81.04
VIT_07s0031g01330.t01	Wine grape	mitochondrion	43.18	80.51
PGSC0003DMT400033328	Potato	extracellular	42.95	79.92
KRH43286	Soybean	mitochondrion	42.84	79.37
Solyc04g054310.2.1	Tomato	extracellular, plastid	42.39	78.86
KRH59427	Soybean	mitochondrion	42.73	78.83
KRH31231	Soybean	mitochondrion	41.59	77.38
KXG40078	Sorghum	mitochondrion	40.45	74.32
Zm00001d027861_P001	Maize	mitochondrion	40.34	74.27
TraesCS4A01G015900.1	Wheat	mitochondrion	40.0	73.49
HORVU4Hr1G075360.5	Barley	mitochondrion	40.0	73.49
TraesCS4D01G286900.1	Wheat	mitochondrion	39.77	73.07
TraesCS4B01G288100.1	Wheat	mitochondrion	39.66	72.86
Os03t0171900-01	Rice	mitochondrion	39.77	72.02
KRG97644	Soybean	mitochondrion	31.82	71.98
Bra017119.1-P	Field mustard	mitochondrion	32.61	59.92
Bra000060.1-P	Field mustard	mitochondrion	32.16	59.45
Bra005111.1-P	Field mustard	mitochondrion	31.7	58.86
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	30.23	58.08
Bra008453.1-P	Field mustard	plastid	13.98	27.46
Bra035168.1-P	Field mustard	mitochondrion	13.86	27.05
Bra025033.1-P	Field mustard	mitochondrion	13.3	24.53
Bra017570.1-P	Field mustard	mitochondrion	8.07	24.48
Bra023845.1-P	Field mustard	mitochondrion	12.61	22.16
Bra031332.1-P	Field mustard	mitochondrion	12.27	21.6
Bra031335.1-P	Field mustard	mitochondrion	11.93	20.92
Bra038646.1-P	Field mustard	plastid	10.68	19.87
Bra035836.1-P	Field mustard	plastid	10.68	19.87
Bra031334.1-P	Field mustard	cytosol	4.43	18.48
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	10.23	18.4

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra010671	EnsemblPlants:Bra010671.1
EnsemblPlants:Bra010671.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4D2H1	PFAM:PF00202	ScanProsite:PS00600
PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0002546795	:	:	:	:	:

Description

AT4G39660 (E=6e-249) AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA08:-:15889130..15893837

Molecular Weight (calculated)

95671.3 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.077

Length

880 amino acids

Sequence
(BLAST)

001: MALQRQLLKR VVDRASTSSR IHSPAITFLR SDYSTSSPPQ LPPFDYQPRP YNGPSADEVF QKRKKFLGPS LFHFYQKPLN IVEGKMQYLF DETGRRYLDA
101: FAGIVTVSCG HCHPDILNAI NEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISMRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSMYAKDVQ DHIDYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYDIV RKAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LATKIQFNTF GGNPVCSAGG LAVLNVIDKE RRQTHCAEVG SHLIQRLKDL QKRHDIIGDV
401: RGRGLMVGIE LVTDRKDKTP AKAETAVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADVGFFLIY LYYLQLNIVE GKMQYLFDET GRRYLDAFAG
501: IVTVSCGHCH PDILNAINEQ SKLLQHATTI YLHHAIGDFA EALAAKMPGN LKVVYFVNSG SEANELAMMM ARLYTGSLEM ISMRNAYHGG SSNTIGLTAL
601: NTWKYPLPQG EIHHVVNPDP YRGVFGSDGS MYAKDVQDHI DYGTSGKVAG FIAETIQGVG GAVELAPGYL KSVYDIVRKA GGVCIADEVQ TGFGRTGSHY
701: WGFQTQDVVP DIVTMAKGIG NGLPLGAVVT TPEIASVLAT KIQFNTFGGN PVCSAGGLAV LNVIDKERRQ THCAEVGSHL IQRLKDLQKR HDIIGDVRGR
801: GLMVGIELVT DRKDKTPAKA ETAVLFEQLR ELGILVGKGG LHGNVFRIKP PMCFTKDDAE HSVCPFALSP SHYLVSSVGL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.