Factsheet for Os03t0171900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40078	Sorghum	mitochondrion	87.45	88.73
TraesCS4A01G015900.1	Wheat	mitochondrion	86.63	87.89
HORVU4Hr1G075360.5	Barley	mitochondrion	86.63	87.89
TraesCS4D01G286900.1	Wheat	mitochondrion	86.42	87.68
Zm00001d027861_P001	Maize	mitochondrion	86.21	87.66
TraesCS4B01G288100.1	Wheat	mitochondrion	86.21	87.47
GSMUA_Achr10P...	Banana	peroxisome	74.69	86.02
VIT_07s0031g01330.t01	Wine grape	mitochondrion	75.31	77.54
PGSC0003DMT400033328	Potato	extracellular	73.87	75.9
Solyc04g054310.2.1	Tomato	extracellular, plastid	73.25	75.26
AT4G39660.1	Thale cress	mitochondrion	73.66	75.21
CDX90347	Canola	mitochondrion	73.66	75.21
CDY63451	Canola	mitochondrion	73.25	74.79
CDY42643	Canola	mitochondrion	73.05	74.58
CDY41995	Canola	mitochondrion	72.63	74.16
Bra011843.1-P	Field mustard	mitochondrion	72.63	74.16
KRH43286	Soybean	mitochondrion	72.43	74.11
KRH59427	Soybean	mitochondrion	71.4	72.75
KRH31231	Soybean	mitochondrion	70.37	72.3
KRG97644	Soybean	mitochondrion	54.12	67.61
Os05t0475400-02	Rice	peroxisome	51.44	63.94
Os03t0338000-01	Rice	peroxisome	59.88	60.12
Bra010671.1-P	Field mustard	mitochondrion	72.02	39.77
Os05t0129100-00	Rice	plastid	17.9	26.69
Os07t0461900-01	Rice	plastid	17.9	26.52
Os02t0112900-00	Rice	cytosol	23.87	24.02
Os04t0614600-01	Rice	mitochondrion	25.31	23.84
Os04t0614500-01	Rice	plastid	23.66	23.14
Os08t0205900-01	Rice	mitochondrion	24.07	22.94
Os03t0643300-02	Rice	mitochondrion	21.81	22.41
Os08t0532200-01	Rice	plastid	20.37	20.71

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4331779	MapMan:6.2.4.6	ProteinID:ABF94223.1	ProteinID:ABF94224.1
EMBL:AK061079	InterPro:Aminotrans_3	ProteinID:BAF11029.1	ProteinID:BAS82540.1	ProteinID:EAZ25753.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0008270
GO:GO:0008453	GO:GO:0008483	GO:GO:0016020	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802
GO:GO:0046686	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlantsGene:Os03g0171900	EnsemblPlants:Os03t0171900-01	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q10R45	SUPFAM:SSF53383	UniParc:UPI0000DB410C	RefSeq:XP_015633093.1	SEG:seg

Description

Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-01);Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-02)

Coordinates

chr3:+:3854304..3858338

Molecular Weight (calculated)

52726.6 Da

IEP (calculated)

8.427

GRAVY (calculated)

-0.147

Length

486 amino acids

Sequence
(BLAST)

001: MAVSSSSLLL RRGATGGAGR RWGPGEALRR LVSSSEAAPA EKVPARSPPV MPPFEHRPRP YAGWSGDEIL AKRKQFLGSS VFYYYQKPLN IVEGKMQYLY
101: DENGKRYLDC FGGIVTVSCG HCHPDIVNAV VEQTKLLQHT TTIYLNQPIV EFAEALASKM PGNLKVVYFV NSGTEANELA MLMARLYSGN LNMIALRNAY
201: HGGSAGTIGL TGLQTWKYPI PQGEIHHVMN PDPYRGTFGS DAVAYAKEVE EQINYGTSGR VAGFIAETFQ GVGGAVELAP GYLKLAYDTV RKAGGVCIAD
301: EVQSGFGRTG SHYWGFQTQD VIPDIVTMAK GIGNGLPLGA VVTTPEIANV LAQKIQFNTF GGNPVCSVGG LAVLKVLDKE KRQAHCADVG SHLVNRLKEL
401: QQKHEIIGDV RGRGLMLGVE LVTDRKEKTP AKAETNLLFE KLKDLNILVG KGGLHGNVFR IKPPMCFTRD DADYLVDAMD YAMSGL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.