Factsheet for GSMUA_Achr10P18980_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
mitochondrion 2
peroxisome 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G015900.1	Wheat	mitochondrion	87.68	77.24
HORVU4Hr1G075360.5	Barley	mitochondrion	87.44	77.04
TraesCS4D01G286900.1	Wheat	mitochondrion	87.44	77.04
TraesCS4B01G288100.1	Wheat	mitochondrion	87.2	76.83
KXG40078	Sorghum	mitochondrion	86.97	76.62
VIT_07s0031g01330.t01	Wine grape	mitochondrion	85.31	76.27
Zm00001d027861_P001	Maize	mitochondrion	86.26	76.15
PGSC0003DMT400033328	Potato	extracellular	85.31	76.11
Solyc04g054310.2.1	Tomato	extracellular, plastid	83.89	74.84
Os03t0171900-01	Rice	mitochondrion	86.02	74.69
CDY42643	Canola	mitochondrion	83.89	74.37
CDY41995	Canola	mitochondrion	83.65	74.16
CDX90347	Canola	mitochondrion	83.65	74.16
Bra011843.1-P	Field mustard	mitochondrion	83.65	74.16
CDY63451	Canola	mitochondrion	83.41	73.95
AT4G39660.1	Thale cress	mitochondrion	83.41	73.95
KRH31231	Soybean	mitochondrion	82.46	73.57
KRH43286	Soybean	mitochondrion	82.46	73.26
KRH59427	Soybean	mitochondrion	82.23	72.75
KRG97644	Soybean	mitochondrion	62.09	67.35
GSMUA_Achr5P08560_001	Banana	peroxisome	66.11	63.99
GSMUA_Achr8P17090_001	Banana	peroxisome	63.98	60.4
GSMUA_Achr6P32610_001	Banana	mitochondrion	67.06	59.45
GSMUA_Achr1P17230_001	Banana	peroxisome	29.38	54.87
Bra010671.1-P	Field mustard	mitochondrion	81.04	38.86
GSMUA_Achr9P04450_001	Banana	cytosol	31.04	32.67
GSMUA_Achr11P...	Banana	cytosol	27.49	31.61
GSMUA_Achr5P28220_001	Banana	cytosol	17.54	30.45
GSMUA_Achr10P...	Banana	mitochondrion	26.54	23.63
GSMUA_Achr5P00340_001	Banana	mitochondrion	27.01	22.57
GSMUA_Achr6P07940_001	Banana	plastid	22.27	19.83

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008453
GO:GO:0008483	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019544
GO:GO:0030170	GO:GO:0046686	EnsemblPlantsGene:GSMUA_Achr10G18980_001	EnsemblPlants:GSMUA_Achr10P18980_001	EnsemblPlants:GSMUA_Achr10T18980_001	InterPro:IPR015421
InterPro:IPR015422	UniProt:M0RJH3	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986
PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002965A8E
SEG:seg	:	:	:	:	:

Description

Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G18980_001]

Coordinates

chr10:+:25509240..25512827

Molecular Weight (calculated)

45813.5 Da

IEP (calculated)

7.231

GRAVY (calculated)

-0.005

Length

422 amino acids

Sequence
(BLAST)

001: MLADEVLEKR KKFLGPSLFY YYQKPLNIVE GKMQYLYDET GKRYLDAFAG IVTVSCGHCH PDVVNAVVEQ SQLLQHTTTI YLHHAIVEFA EALASKMPGN
101: LKVVYFVNSG TEANELAMLM ARMYTGNLGM IALRNAYHGG SAGTIGLTAL HTWKYPIPQG EIHHVMNPDP YRGAFGSDAA HYAKEVEDHI NYGTSGNVAG
201: FIAETFQGVG GAVELAPGYL KLVYDIVRKS GGVCIADEVQ SGFGRTGSHY WGFETQGVIP DIVTMAKGIG NGLPLGAVVT TPEIASVMSK RIQFNTFGGN
301: PVCSAGGLAV LKVLDKEKRQ AHCADVGFQL IDRLRTLQQK HDIIGDVRGR GLMLGVELVS DKDKTPAKAE AAVLFEKLKD LGVLVGKGGL HGNVFRIKPP
401: MCFTKQDADF LVDALDYAIS RL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.