Factsheet for TraesCS4B01G288100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G286900.1	Wheat	mitochondrion	98.75	98.75
TraesCS4A01G015900.1	Wheat	mitochondrion	97.91	97.91
HORVU4Hr1G075360.5	Barley	mitochondrion	97.91	97.91
KXG40078	Sorghum	mitochondrion	89.77	89.77
Zm00001d027861_P001	Maize	mitochondrion	88.52	88.7
GSMUA_Achr10P...	Banana	peroxisome	76.83	87.2
Os03t0171900-01	Rice	mitochondrion	87.47	86.21
PGSC0003DMT400033328	Potato	extracellular	76.2	77.17
Solyc04g054310.2.1	Tomato	extracellular, plastid	75.37	76.32
VIT_07s0031g01330.t01	Wine grape	mitochondrion	75.16	76.27
CDX90347	Canola	mitochondrion	74.32	74.79
KRH43286	Soybean	mitochondrion	74.11	74.74
AT4G39660.1	Thale cress	mitochondrion	74.11	74.58
CDY63451	Canola	mitochondrion	74.11	74.58
CDY42643	Canola	mitochondrion	73.7	74.16
CDY41995	Canola	mitochondrion	73.49	73.95
Bra011843.1-P	Field mustard	mitochondrion	73.49	73.95
KRH59427	Soybean	mitochondrion	73.49	73.79
KRH31231	Soybean	mitochondrion	70.98	71.88
KRG97644	Soybean	mitochondrion	54.49	67.1
TraesCS4B01G167100.1	Wheat	mitochondrion	60.54	63.18
TraesCS1B01G308900.1	Wheat	mitochondrion	60.13	60.38
Bra010671.1-P	Field mustard	mitochondrion	72.86	39.66
TraesCS1B01G090600.1	Wheat	plastid	24.22	25.22
TraesCS2B01G440400.1	Wheat	golgi	26.3	24.66
TraesCS5B01G376900.1	Wheat	mitochondrion	23.59	24.15
TraesCS7B01G253600.1	Wheat	cytosol, nucleus, peroxisome	24.01	23.76
TraesCS7B01G246800.1	Wheat	mitochondrion	24.43	23.03
TraesCS7B01G158800.1	Wheat	plastid	20.46	20.76

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0008270	GO:GO:0008483	GO:GO:0016020
GO:GO:0016740	GO:GO:0030170	GO:GO:0046686	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS4B01G288100	EnsemblPlants:TraesCS4B01G288100.1	TIGR:cd00610	SEG:seg

Description

No Description!

Coordinates

chr4B:+:573273300..573276188

Molecular Weight (calculated)

51859.7 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.129

Length

479 amino acids

Sequence
(BLAST)

001: MAASLLRRAA SGRGRCPSPA ESLRRLVSSE AAPEQALPRP LPEMRPFEHR PSPYAGMGGA EILEKRKKFL GPSLFYYYQK PLNIVEGKMQ YLYDEQGKRY
101: LDCFGGIVTV SCGHCHPDIV KAVQEQTKLL QHTTTIYLHH AIVEFAEALA SKMPGNLKVV YFVNSGTEAN ELAMLMARLY SGNLGMVALR NGYHGGSAGT
201: IGLTGLQTWK YPIPQGEIHH VMNPDPYRGA FGSDAAAYAR EVEEHINFGS SGRVGGFIAE TFQGVGGTVE LAPGYLKSVY DTVRKAGGVC IADEVQSGFG
301: RTGSNYWGFQ TQDVIPDIVT MAKGIGNGLP LGAVVTTPEI ASVMAQKIQF NTFGGNPVCS AGGLAVLKVL DKEKRQAHCA DVGVHLVERL KSLQQKHEII
401: GDVRGRGLML GVELVTDRTE KTPAKAETAL LFEKLKDLGV LVGKGGLHSN VFRIKPPMCF SKDDADFLVD AMDYAMSGF

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.