Factsheet for Bra017119.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54421	Canola	mitochondrion	96.24	95.84
Bra000060.1-P	Field mustard	mitochondrion	87.89	88.45
Bra005111.1-P	Field mustard	mitochondrion	87.06	87.97
AT2G38400.2	Thale cress	mitochondrion	84.55	82.15
GSMUA_Achr5P08560_001	Banana	peroxisome	69.52	76.38
Os05t0475400-02	Rice	peroxisome	61.38	75.19
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	74.53	74.84
VIT_06s0004g07660.t01	Wine grape	mitochondrion	72.65	72.8
GSMUA_Achr8P17090_001	Banana	peroxisome	67.43	72.26
Solyc10g076250.1.1	Tomato	mitochondrion	70.77	70.92
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	70.56	70.71
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.94	70.38
EES19688	Sorghum	mitochondrion	70.35	70.35
KRH76075	Soybean	mitochondrion	69.73	70.32
TraesCS1D01G292100.1	Wheat	mitochondrion	69.73	70.02
KRH65497	Soybean	mitochondrion	69.1	69.68
TraesCS1B01G308900.1	Wheat	mitochondrion	69.31	69.6
TraesCS1A01G299100.1	Wheat	mitochondrion	69.1	69.39
Zm00001d038460_P007	Maize	plasma membrane	67.64	69.08
EER94889	Sorghum	mitochondrion	67.01	69.03
KRH00394	Soybean	mitochondrion	69.31	68.88
TraesCS4B01G167100.1	Wheat	mitochondrion	65.76	68.63
TraesCS4A01G137000.1	Wheat	mitochondrion	65.76	68.63
TraesCS4D01G170300.1	Wheat	mitochondrion	65.55	68.41
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	65.14	68.12
Os03t0338000-01	Rice	peroxisome	66.81	66.12
HORVU1Hr1G070220.2	Barley	mitochondrion	67.85	65.79
Zm00001d038453_P003	Maize	mitochondrion	69.1	65.03
Zm00001d029083_P001	Maize	extracellular	61.17	64.82
Bra011843.1-P	Field mustard	mitochondrion	60.13	60.5
GSMUA_Achr1P17230_001	Banana	peroxisome	27.14	57.52
Zm00001d043951_P001	Maize	cytosol	26.1	57.08
Bra010671.1-P	Field mustard	mitochondrion	59.92	32.61
Bra008453.1-P	Field mustard	plastid	25.89	27.68
Bra035168.1-P	Field mustard	mitochondrion	25.89	27.49
Bra017570.1-P	Field mustard	mitochondrion	15.24	25.17
Bra025033.1-P	Field mustard	mitochondrion	25.05	25.16
Bra023845.1-P	Field mustard	mitochondrion	22.76	21.76
Bra031332.1-P	Field mustard	mitochondrion	22.55	21.6
Bra031335.1-P	Field mustard	mitochondrion	21.92	20.92
Bra038646.1-P	Field mustard	plastid	20.25	20.51
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	20.67	20.25
Bra035836.1-P	Field mustard	plastid	19.83	20.08
Bra031334.1-P	Field mustard	cytosol	8.77	19.91

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra017119	EnsemblPlants:Bra017119.1
EnsemblPlants:Bra017119.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4DKT8	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI00025449C2	SEG:seg	:	:	:

Description

AT2G38400 (E=3e-236) AGT3 | AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA04:+:16518202..16520405

Molecular Weight (calculated)

51880.3 Da

IEP (calculated)

7.176

GRAVY (calculated)

-0.068

Length

479 amino acids

Sequence
(BLAST)

001: MQRLTAKRTV HNVSLSLSRR CISSCTSQTA TAAPVDEFLG KLPPFSYTPP PYTGPSADAI INTRKEFLSP SNSMFCLYKN PLNIVDGKMQ YLFDESGRRY
101: LDAFAGIAVV NCGHCHPGVV EPVINQIKRL QHPTVMYLNH AIAEFSEALA SKLPGDLKVV FFTNSGTEAN ELALMMAKLY TGCQDIVSIR NGYHGNAPGT
201: MGATAHSTWK FNNVVQTGTH HALNPDPYRG VFGSDGEKYA RDVQDLIQYG TSGHIAGFIC ETIQGVGGIV ELAPGYQSAA YDIVKKAGGL FIADEVQSGF
301: ARTGDFWGFE AHNVVPDIVT MAKGIGNGFP LGAVVTTPEI AGVLTRRCYF NTFGGNAVAA TAGLAVLDVI EKDNLQENAS MVGSYLKGRL SQLKEKHEII
401: GDVRGRGLML GVELVSDRKL KTPATAETLH IMNQMKELGV LVGKGGHFGN VFRITPPLCF TKEDADYLVE TMDYSMSRM

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.