Factsheet for TraesCS4A01G137000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G170300.1	Wheat	mitochondrion	98.91	98.91
TraesCS4B01G167100.1	Wheat	mitochondrion	98.04	98.04
EER94889	Sorghum	mitochondrion	90.85	89.68
Zm00001d029083_P001	Maize	extracellular	83.66	84.96
Os03t0338000-01	Rice	peroxisome	89.11	84.5
TraesCS1A01G299100.1	Wheat	mitochondrion	79.08	76.1
GSMUA_Achr6P32610_001	Banana	mitochondrion	76.91	74.16
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	76.03	73.17
CDY61533	Canola	peroxisome	29.41	72.19
VIT_06s0004g07660.t01	Wine grape	mitochondrion	74.95	71.97
KRH76075	Soybean	mitochondrion	73.86	71.37
KRH00394	Soybean	mitochondrion	74.51	70.95
Solyc10g076250.1.1	Tomato	mitochondrion	73.64	70.71
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	73.64	70.71
KRH65497	Soybean	mitochondrion	72.98	70.53
AT3G08860.1	Thale cress	mitochondrion	72.77	69.44
CDY00650	Canola	mitochondrion	71.02	69.36
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	68.85	69.0
CDY00651	Canola	mitochondrion	70.59	68.94
CDX73944	Canola	mitochondrion	70.37	68.72
CDY14465	Canola	cytosol	62.96	68.0
CDY54458	Canola	mitochondrion	68.63	66.46
Bra005111.1-P	Field mustard	mitochondrion	68.19	66.03
Bra000060.1-P	Field mustard	mitochondrion	68.41	65.97
Bra017119.1-P	Field mustard	mitochondrion	68.63	65.76
CDY54421	Canola	mitochondrion	67.76	64.66
CDY66720	Canola	mitochondrion	68.85	64.23
AT2G38400.2	Thale cress	mitochondrion	68.63	63.89
CDY61531	Canola	mitochondrion	29.19	63.81
CDY18386	Canola	mitochondrion	32.24	63.52
TraesCS4A01G015900.1	Wheat	mitochondrion	63.4	60.75
CDY71561	Canola	mitochondrion	28.76	59.46
TraesCS1A01G072200.1	Wheat	plastid	27.67	27.79
TraesCS5A01G375000.1	Wheat	mitochondrion	25.27	24.58
TraesCS2A01G421400.1	Wheat	mitochondrion	24.84	22.31
TraesCS7A01G260800.2	Wheat	plastid	21.79	21.19
TraesCS7A01G373400.1	Wheat	plastid	21.57	21.06
TraesCS7A01G334200.1	Wheat	mitochondrion	22.88	20.35

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS4A01G137000	EnsemblPlants:TraesCS4A01G137000.1	TIGR:cd00610

Description

No Description!

Coordinates

chr4A:+:195390832..195392997

Molecular Weight (calculated)

49873.1 Da

IEP (calculated)

7.260

GRAVY (calculated)

0.002

Length

459 amino acids

Sequence
(BLAST)

001: MLGARRSFSR LAAAVRTPVD VPRMPAFDHV PLPYDGPSAV EIARKRAEFL SPSLFHFYSK PLNIVEGKKQ YLYDEHGRRY LDAFAGIATV CCGHTHPDII
101: DAITAQANRL QHSTVLYLNH AIADFAEALA AKMPGDLKVV FFTNSGTEAN ELAIMMARLY TGSHDIISLR NSYHGNASGT MGATAQKNWK FNVVQSGVHH
201: AVNPDPYRGA FGPDGEKYAR DVKEIIEFGT TGHVAGFISE AIQGVGGIVE VAPGYLPLAY DAVRKAGGLC IADEVQVGFA RVGSHFWGFE THGVIPDIVT
301: MAKGIGNGIP LGAVVTTPEI AQVLTRRSYF NTFGGNPLCT AGGLAVLKVL DRERLQENAF IVGAYLKDRL RGLQEKHQII GDVRGAGFML GVELVTDRQL
401: KTPAKDEICQ AMEHMKDMGV LVGKGGFYGN VFRITPPLCF TKEDADFFVD VMDIALSKL

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.