CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00651	Canola	mitochondrion	99.57	99.57
CDX73944	Canola	mitochondrion	97.45	97.45
CDY71561	Canola	mitochondrion	45.74	96.85
AT3G08860.1	Thale cress	mitochondrion	91.49	89.4
CDY61533	Canola	peroxisome	30.21	75.94
Os05t0475400-02	Rice	peroxisome	62.13	74.68
GSMUA_Achr5P08560_001	Banana	peroxisome	69.15	74.54
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	73.62	72.54
TraesCS4B01G167100.1	Wheat	mitochondrion	70.43	72.11
TraesCS4D01G170300.1	Wheat	mitochondrion	69.57	71.24
KRH76075	Soybean	mitochondrion	71.91	71.16
TraesCS4A01G137000.1	Wheat	mitochondrion	69.36	71.02
KRH65497	Soybean	mitochondrion	71.7	70.95
EES19688	Sorghum	mitochondrion	71.7	70.35
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	71.49	70.29
Zm00001d038460_P007	Maize	plasma membrane	70.0	70.15
GSMUA_Achr8P17090_001	Banana	peroxisome	66.38	69.8
EER94889	Sorghum	mitochondrion	68.94	69.68
Solyc10g076250.1.1	Tomato	mitochondrion	70.64	69.46
CDY14465	Canola	cytosol	62.77	69.41
KRH00394	Soybean	mitochondrion	71.06	69.29
VIT_06s0004g07660.t01	Wine grape	mitochondrion	70.21	69.04
TraesCS1B01G308900.1	Wheat	mitochondrion	69.79	68.76
TraesCS1D01G292100.1	Wheat	mitochondrion	69.79	68.76
TraesCS1A01G299100.1	Wheat	mitochondrion	69.57	68.55
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.36	68.49
CDY54458	Canola	mitochondrion	68.72	68.14
CDY18386	Canola	mitochondrion	33.62	67.81
CDY54421	Canola	mitochondrion	69.36	67.78
Os03t0338000-01	Rice	peroxisome	69.79	67.77
Zm00001d029083_P001	Maize	extracellular	63.19	65.71
CDY66720	Canola	mitochondrion	68.72	65.65
Zm00001d038453_P003	Maize	mitochondrion	70.85	65.42
HORVU1Hr1G070220.2	Barley	mitochondrion	67.87	64.57
CDY61531	Canola	mitochondrion	28.72	64.29
CDY41995	Canola	mitochondrion	60.43	59.66
CDX90347	Canola	mitochondrion	60.21	59.45
CDY63451	Canola	mitochondrion	60.0	59.24
CDY42643	Canola	mitochondrion	60.0	59.24
GSMUA_Achr1P17230_001	Banana	peroxisome	28.3	58.85
Zm00001d043951_P001	Maize	cytosol	27.02	57.99
CDY67620	Canola	mitochondrion, plastid	24.89	26.12
CDY37615	Canola	mitochondrion	24.68	25.89
CDY39963	Canola	mitochondrion	24.47	25.5
CDX87325	Canola	mitochondrion	24.26	25.28
CDX77642	Canola	mitochondrion	21.7	23.94
CDY33459	Canola	mitochondrion	21.28	23.42
CDY35151	Canola	mitochondrion	18.51	22.83
CDY58748	Canola	mitochondrion	22.98	21.69
CDY39506	Canola	mitochondrion	22.77	21.15
CDY37389	Canola	mitochondrion	22.34	21.0
CDY10622	Canola	golgi	21.06	20.97
CDY10619	Canola	mitochondrion	22.13	20.8
CDX81186	Canola	plastid	19.79	19.66
CDY16715	Canola	plastid	19.57	19.45
CDY41519	Canola	plastid	19.57	19.45
CDY62883	Canola	plastid	19.57	19.45
CDY68670	Canola	cytosol	18.3	19.28
CDY03236	Canola	cytosol	15.74	19.22
CDY10621	Canola	extracellular, plastid	8.3	16.53

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078EF08	InterPro:Aminotrans_3	EnsemblPlants:CDY00650
ProteinID:CDY00650	ProteinID:CDY00650.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00110474001	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EE9BBD	SEG:seg	:	:

Description

BnaC03g36340D

Coordinates

chrLK031921:+:8094..11549

Molecular Weight (calculated)

51583.1 Da

IEP (calculated)

7.751

GRAVY (calculated)

-0.096

Length

470 amino acids

Sequence
(BLAST)

001: MRMLTTAVNT LLKRENSLLQ RHGFAHVVAQ RTNSVHQTET KVPKIPPFSY SPPPYDGPST GEIIAKRREF LSPALFHFYN TPLNIVEGKK QYVFDETGRR
101: YLDAFGGIAT VSCGHSHPEV VESVIKQLKL IQHSTTLYLN HTISDFAEAL VSTLPGDLKV VFFTNSGTEA NELAMMMARL YTGCNDVVSL RNSYHGNAAA
201: TMGATAQSNW KFNVVQSGVH HAINPDPYRG IFGSDGEKYA RDVHDLIQFG TSGQGVGGIV ELAPGYLPAA YDIVRRAGGV CIADEVQSGF ARTGTHFWGF
301: QSHDVIPDIV TMAKGIGNGI PLGAVVTTPE IAGVLSRRFY FNTFGGNPMC TAAGHAVLRV IQEEKLQENA FLVGSHLKRR LTQLKDKYEL IGDVRGRGLM
401: LGVEFVTDRD LKTPAKLETL HLMDQMKEMG VLVGKGGFYG NVFRITPPLC FTLNDADFLV DVMDHALSKM

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.