Factsheet for TraesCS1A01G072200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G074600.1	Wheat	plastid	98.47	97.83
TraesCS1B01G090600.1	Wheat	plastid	97.59	96.96
HORVU1Hr1G015560.5	Barley	plastid	97.59	87.11
Os05t0129100-00	Rice	plastid	58.86	82.52
Os07t0461900-01	Rice	plastid	58.86	82.01
EES17651	Sorghum	plastid	77.02	75.54
GSMUA_Achr11P...	Banana	cytosol	58.42	72.75
GSMUA_Achr9P04450_001	Banana	cytosol	63.02	71.82
Zm00001d035443_P001	Maize	plastid	74.4	68.69
VIT_09s0002g08670.t01	Wine grape	plastid	65.21	64.36
PGSC0003DMT400058543	Potato	cytosol, plastid	63.46	63.46
KRH35638	Soybean	cytosol	63.68	62.85
GSMUA_Achr5P28220_001	Banana	cytosol	33.26	62.55
VIT_19s0027g01790.t01	Wine grape	plastid	63.9	62.53
CDY67620	Canola	mitochondrion, plastid	61.27	62.5
CDY37615	Canola	mitochondrion	61.27	62.5
Bra008453.1-P	Field mustard	plastid	61.05	62.28
Solyc08g080370.2.1	Tomato	plastid	62.58	62.17
KRH48868	Soybean	nucleus	63.46	62.1
Bra035168.1-P	Field mustard	mitochondrion	61.27	62.08
CDY39963	Canola	mitochondrion	61.05	61.86
CDX87325	Canola	mitochondrion	60.83	61.64
AT1G80600.1	Thale cress	plastid	60.83	60.83
CDY68670	Canola	cytosol	45.08	46.19
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	45.3	42.33
TraesCS4A01G137000.1	Wheat	mitochondrion	27.79	27.67
TraesCS1A01G299100.1	Wheat	mitochondrion	27.57	26.42
TraesCS5A01G375000.1	Wheat	mitochondrion	26.91	26.06
TraesCS4A01G015900.1	Wheat	mitochondrion	26.26	25.05
TraesCS7A01G260800.2	Wheat	plastid	23.63	22.88
TraesCS2A01G421400.1	Wheat	mitochondrion	25.16	22.5
TraesCS7A01G334200.1	Wheat	mitochondrion	24.51	21.71
TraesCS7A01G373400.1	Wheat	plastid	20.57	20.0

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	InterPro:AcOrn/SuccOrn_fam	InterPro:Aminotrans_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006525	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	HAMAP:MF_01107
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00707	EnsemblPlantsGene:TraesCS1A01G072200	EnsemblPlants:TraesCS1A01G072200.1
TIGR:cd00610	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:54461252..54463175

Molecular Weight (calculated)

48197.0 Da

IEP (calculated)

6.843

GRAVY (calculated)

0.085

Length

457 amino acids

Sequence
(BLAST)

001: MNSLQSFLAV APVKPAAAAA RLPSSRRARV SACLATPAPA PTAPAAARRE LSAASRAVMA DEAKYIVGTY KRAQVVFVAG RGCKLYDIDG REYLDMAAGI
101: AVNALGHGDP DVDAAAADQR GRLVHASNVG YTVPQVELAK RLVEASFADR AFFANSGTEA NEAAIKFARK YQRVAHPNGD APTEFMSFTN CFHGRTIGSL
201: ALTSKVQYRE PFEPVMPGST FVEYGNLEEA KKVIQSGKIA AVFVEPVQGE GGIHSATNEF LQGLRDACDE AGALLVFDEV QCGLGRTGYL WAHEVYGVLP
301: DIMTLAKPLA NGLPIGVALV TEKVAAAIHY GDHGTTFGGG PFVCHAALAT LDKIQKPGFL AEVTKKGEYF KQLLKTKLGG NPHVKEIRGA GLIVGIELDV
401: PAGPLVDACL DAGVFLLTAG KGNVVRLVPA LIVSEKELEQ AAEVIRECLP ALEASTS

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.