Factsheet for Zm00001d035443_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plastid: 20089766
plastid: 22065420
plastid: 23198870
mitochondrion: 29575040

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17651	Sorghum	plastid	84.44	89.7
TraesCS1B01G090600.1	Wheat	plastid	69.49	74.78
TraesCS1A01G072200.1	Wheat	plastid	68.69	74.4
TraesCS1D01G074600.1	Wheat	plastid	69.09	74.35
Os05t0129100-00	Rice	plastid	48.69	73.93
Os07t0461900-01	Rice	plastid	48.28	72.87
HORVU1Hr1G015560.5	Barley	plastid	71.31	68.95
GSMUA_Achr11P...	Banana	cytosol	50.51	68.12
GSMUA_Achr9P04450_001	Banana	cytosol	54.14	66.83
PGSC0003DMT400058543	Potato	cytosol, plastid	56.77	61.49
CDY67620	Canola	mitochondrion, plastid	55.15	60.94
CDY37615	Canola	mitochondrion	54.95	60.71
Bra008453.1-P	Field mustard	plastid	54.75	60.49
VIT_09s0002g08670.t01	Wine grape	plastid	56.57	60.48
Solyc08g080370.2.1	Tomato	plastid	56.16	60.43
Bra035168.1-P	Field mustard	mitochondrion	54.75	60.09
GSMUA_Achr5P28220_001	Banana	cytosol	29.49	60.08
CDY39963	Canola	mitochondrion	54.34	59.65
CDX87325	Canola	mitochondrion	54.34	59.65
AT1G80600.1	Thale cress	plastid	54.75	59.3
KRH48868	Soybean	nucleus	55.56	58.89
KRH35638	Soybean	cytosol	54.95	58.75
VIT_19s0027g01790.t01	Wine grape	plastid	54.95	58.24
CDY68670	Canola	cytosol	41.21	45.74
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	41.41	41.92
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	5.86	27.1
Zm00001d033228_P002	Maize	mitochondrion	25.66	26.02
Zm00001d038460_P007	Maize	plasma membrane	24.65	26.01
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	8.08	25.97
Zm00001d027861_P001	Maize	mitochondrion	24.44	25.31
Zm00001d029083_P001	Maize	extracellular	23.03	25.22
Zm00001d038453_P003	Maize	mitochondrion	25.25	24.56
Zm00001d015445_P008	Maize	cytosol	6.87	23.78
Zm00001d043951_P001	Maize	cytosol	10.3	23.29
Zm00001d015444_P003	Maize	mitochondrion	9.9	23.11
Zm00001d038547_P001	Maize	plastid	21.21	22.15
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	22.02	21.21
Zm00001d002326_P003	Maize	mitochondrion	21.82	20.85
Zm00001d026293_P001	Maize	mitochondrion	21.01	20.23

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	UniProt:A0A1D6LGE4	ProteinID:AQK78988.1	InterPro:Aminotrans_3
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986
PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000221F2E7
EnsemblPlantsGene:Zm00001d035443	EnsemblPlants:Zm00001d035443_P001	EnsemblPlants:Zm00001d035443_T001	SEG:seg	:	:

Description

Putative acetylornithine/succinylornithine aminotransferase family protein

Coordinates

chr6:-:25695036..25697069

Molecular Weight (calculated)

52078.6 Da

IEP (calculated)

7.289

GRAVY (calculated)

0.145

Length

495 amino acids

Sequence
(BLAST)

001: MASLQSFLAV KPAAGWAAPS RRARVAAFLA PPPPTTAAAV GAARRELSAA SLAVVDGEAR YLVGTYKRSR VVFEHGRGCK LYDTDGREYL DMAAGIAVTA
101: LGHADPDVCA TIAEQAGKVV HVSNVFYTKP QVGAPAPSDP PSPASLAMCS THCSGRPIFL CFICRSASLS QVELAKRLVE VSFADRAFFA STGTEANEAA
201: IKFSRKFQRA AHPESGDPPT EFLAFSSSFH GRTMGAVALT SKSQYREPFA PVMPGVTFVD YGDLEAAKKF VRSGRVAAVF VEPVQGEGGI HSATREFLQG
301: LRDACDEAGA LLVFDEVQCG FGRTGHLWAH EAYGVEPDIM TLAKPLANGI PIGVVLVKEK IAAAINYGDH GTTFGGGPLA CQTAITVFDK ITRPGFLAEV
401: SRKGESFKQL LRAKLSGNPH VREVRGVGLL VGVELDVPAG PLVDACLDAG VVVLTAGKGN VVRLVPPLIV SEKELEHAAD VIRDCLPALD VVAAA

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.