Factsheet for Zm00001d015444_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015445_P008	Maize	cytosol	66.51	98.6
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	71.23	98.05
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	51.89	35.95
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	80.66	33.27
EES14702	Sorghum	mitochondrion	79.72	33.2
Os08t0205900-01	Rice	mitochondrion	75.47	31.37
TraesCS7D01G341900.2	Wheat	mitochondrion	74.06	30.91
TraesCS7B01G246800.1	Wheat	mitochondrion	73.58	30.71
TraesCS7A01G334200.1	Wheat	mitochondrion	69.34	28.49
GSMUA_Achr5P00340_001	Banana	mitochondrion	66.98	28.12
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	74.06	27.99
CDY58748	Canola	mitochondrion	65.09	27.71
Bra031332.1-P	Field mustard	mitochondrion	65.09	27.6
CDY10619	Canola	mitochondrion	65.09	27.6
CDY37389	Canola	mitochondrion	65.09	27.6
Bra023845.1-P	Field mustard	mitochondrion	65.09	27.54
CDY39506	Canola	mitochondrion	65.09	27.27
Zm00001d026293_P001	Maize	mitochondrion	66.04	27.24
Zm00001d002326_P003	Maize	mitochondrion	66.04	27.03
Bra031334.1-P	Field mustard	cytosol	26.89	27.01
KRH24110	Soybean	mitochondrion	64.15	26.51
Solyc12g006470.1.1	Tomato	extracellular, nucleus	57.08	26.42
VIT_03s0017g01760.t01	Wine grape	mitochondrion	65.57	26.38
CDY10622	Canola	golgi	58.49	26.27
PGSC0003DMT400030683	Potato	mitochondrion	63.68	26.21
AT3G22200.2	Thale cress	mitochondrion	63.21	26.12
Solyc07g043310.2.1	Tomato	nucleus	63.21	26.02
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	59.91	25.76
KRH29085	Soybean	cytosol	64.15	25.66
PGSC0003DMT400064961	Potato	cytosol	55.19	25.55
Solyc08g014610.2.1	Tomato	cytosol	54.72	25.33
PGSC0003DMT400062372	Potato	plastid	60.85	25.0
CDY10621	Canola	extracellular, plastid	27.83	25.0
Solyc12g006450.1.1	Tomato	plastid	60.85	25.0
Bra031335.1-P	Field mustard	mitochondrion	58.02	24.5
Zm00001d035443_P001	Maize	plastid	23.11	9.9
Zm00001d038460_P007	Maize	plasma membrane	21.7	9.81
Zm00001d027861_P001	Maize	mitochondrion	21.7	9.62
Zm00001d038453_P003	Maize	mitochondrion	21.7	9.04
Zm00001d033228_P002	Maize	mitochondrion	20.28	8.81
Zm00001d029083_P001	Maize	extracellular	16.98	7.96
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	3.77	7.48
Zm00001d038547_P001	Maize	plastid	15.57	6.96
Zm00001d043951_P001	Maize	cytosol	5.19	5.02

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:35.1	UniProt:A0A1D6H1Y7	ProteinID:AQK68881.1	ProteinID:AQK68885.1
ProteinID:AQK68892.1	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202	PANTHER:PTHR42684
PANTHER:PTHR42684:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	SignalP:SignalP-noTM
UniParc:UPI00084556DF	EnsemblPlantsGene:Zm00001d015444	EnsemblPlants:Zm00001d015444_P003	EnsemblPlants:Zm00001d015444_T003	SEG:seg	:

Description

Gamma-aminobutyrate transaminase POP2 mitochondrial

Coordinates

chr5:-:90487714..90495272

Molecular Weight (calculated)

22979.1 Da

IEP (calculated)

7.263

GRAVY (calculated)

-0.015

Length

212 amino acids

Sequence
(BLAST)

001: MDGPRTPARR LDLLLLGRLL TGLGWDRSLP RHSRRAVLLL FSETLGASIG DVWKTGGGEV ITAFGRLGTM FGCDMYNIKP DLVSIAKALS SAYMPIGAIL
101: VSPEITDVNY SQSNKLGKSN PIMIRGLGLI LGTEFVDNKS PNDPFPAEWG VGSIFGTECE KRGMLIRVAG DSIMLSPPLI MTPNEVEEII SKFGDALKAT
201: EEQIGELKSR KN

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.