Factsheet for Bra031334.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10621	Canola	extracellular, plastid	96.68	86.44
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	51.66	35.62
Zm00001d015445_P008	Maize	cytosol	22.75	33.57
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	23.22	31.82
Bra031332.1-P	Field mustard	mitochondrion	67.3	28.4
Bra023845.1-P	Field mustard	mitochondrion	67.3	28.34
Zm00001d015444_P003	Maize	mitochondrion	27.01	26.89
Bra031335.1-P	Field mustard	mitochondrion	59.24	24.9
Solyc12g006470.1.1	Tomato	extracellular, nucleus	54.03	24.89
PGSC0003DMT400064961	Potato	cytosol	53.08	24.45
KRH24110	Soybean	mitochondrion	59.24	24.37
Os02t0112900-00	Rice	cytosol	55.45	24.22
Solyc08g014610.2.1	Tomato	cytosol	51.66	23.8
KRH29085	Soybean	cytosol	58.77	23.4
EES14702	Sorghum	mitochondrion	56.4	23.38
TraesCS7B01G253600.1	Wheat	cytosol, nucleus, peroxisome	53.55	23.35
Solyc07g043310.2.1	Tomato	nucleus	56.87	23.3
TraesCS2D01G418400.2	Wheat	mitochondrion	56.4	23.29
EES11419	Sorghum	mitochondrion	56.4	23.29
HORVU2Hr1G098880.1	Barley	mitochondrion	56.4	23.29
PGSC0003DMT400030683	Potato	mitochondrion	56.4	23.11
TraesCS2A01G421400.1	Wheat	mitochondrion	55.92	23.09
TraesCS2B01G440400.1	Wheat	golgi	55.92	23.09
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	53.55	22.92
Solyc12g006450.1.1	Tomato	plastid	55.92	22.87
GSMUA_Achr5P00340_001	Banana	mitochondrion	54.5	22.77
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	55.45	22.76
Os04t0614600-01	Rice	mitochondrion	55.45	22.67
PGSC0003DMT400062372	Potato	plastid	55.45	22.67
TraesCS7B01G246800.1	Wheat	mitochondrion	54.5	22.64
TraesCS7D01G341900.2	Wheat	mitochondrion	54.5	22.64
Os08t0205900-01	Rice	mitochondrion	54.5	22.55
Zm00001d026293_P001	Maize	mitochondrion	54.5	22.37
Os04t0614500-01	Rice	plastid	52.13	22.13
TraesCS7A01G334200.1	Wheat	mitochondrion	53.55	21.9
Zm00001d002326_P003	Maize	mitochondrion	53.55	21.81
TraesCS7A01G373400.1	Wheat	plastid	46.92	21.06
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	55.45	20.86
Bra025033.1-P	Field mustard	mitochondrion	22.75	10.06
Bra005111.1-P	Field mustard	mitochondrion	20.38	9.07
Bra017119.1-P	Field mustard	mitochondrion	19.91	8.77
Bra017570.1-P	Field mustard	mitochondrion	11.85	8.62
Bra000060.1-P	Field mustard	mitochondrion	19.43	8.61
Bra011843.1-P	Field mustard	mitochondrion	18.01	7.98
Bra008453.1-P	Field mustard	plastid	15.64	7.37
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	15.64	7.21
Bra035168.1-P	Field mustard	mitochondrion	15.17	7.1
Bra038646.1-P	Field mustard	plastid	15.64	6.98
Bra035836.1-P	Field mustard	plastid	14.69	6.55
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	14.22	6.13
Bra010671.1-P	Field mustard	mitochondrion	18.48	4.43
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	1.9	3.74

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:35.1	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra031334	EnsemblPlants:Bra031334.1
EnsemblPlants:Bra031334.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008483
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
UniProt:M4ERB1	PFAM:PF00202	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000254760B	SEG:seg	:

Description

AT3G22200 (E=1e-035) POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase

Coordinates

chrA05:-:15921962..15923559

Molecular Weight (calculated)

23436.7 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.073

Length

211 amino acids

Sequence
(BLAST)

001: MWRCGKTEEE LSTRLAKNLK DLIIKEVPET IGAFIAKSVM GAGGVIHPPA TYFEKIQAVV KKYDILFIAD EARDNVCCDK YNIKPDLVSL AKALSSAYLL
101: IGAILMSQEV GYVIFSKQQA RERNIPEHAP RVAPRFQDGL KAFAKSSPII GEIIGTYLIL GISLHFTHNK SQLKRSMMYG REGKRAQGSV KEVRDKSCNA
201: VHEIVVSNIL T

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.