Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67620 | Canola | mitochondrion, plastid | 90.59 | 92.41 |
| CDY37615 | Canola | mitochondrion | 89.93 | 91.74 |
| Bra008453.1-P | Field mustard | plastid | 89.93 | 91.74 |
| CDY39963 | Canola | mitochondrion | 90.15 | 91.35 |
| Bra035168.1-P | Field mustard | mitochondrion | 89.5 | 90.69 |
| CDX87325 | Canola | mitochondrion | 89.28 | 90.47 |
| GSMUA_Achr11P... | Banana | cytosol | 59.52 | 74.11 |
| GSMUA_Achr9P04450_001 | Banana | cytosol | 63.46 | 72.32 |
| PGSC0003DMT400058543 | Potato | cytosol, plastid | 68.93 | 68.93 |
| Solyc08g080370.2.1 | Tomato | plastid | 69.37 | 68.91 |
| VIT_09s0002g08670.t01 | Wine grape | plastid | 69.8 | 68.9 |
| KRH48868 | Soybean | nucleus | 70.02 | 68.52 |
| KRH35638 | Soybean | cytosol | 67.83 | 66.95 |
| GSMUA_Achr5P28220_001 | Banana | cytosol | 35.45 | 66.67 |
| Os05t0129100-00 | Rice | plastid | 47.05 | 65.95 |
| VIT_19s0027g01790.t01 | Wine grape | plastid | 67.18 | 65.74 |
| Os07t0461900-01 | Rice | plastid | 45.73 | 63.72 |
| CDY68670 | Canola | cytosol | 59.96 | 61.44 |
| TraesCS1B01G090600.1 | Wheat | plastid | 61.27 | 60.87 |
| TraesCS1A01G072200.1 | Wheat | plastid | 60.83 | 60.83 |
| TraesCS1D01G074600.1 | Wheat | plastid | 60.83 | 60.43 |
| EES17651 | Sorghum | plastid | 58.64 | 57.51 |
| Bra008457.1-P | Field mustard | cytosol, peroxisome, plastid | 60.18 | 56.24 |
| HORVU1Hr1G015560.5 | Barley | plastid | 61.49 | 54.88 |
| Zm00001d035443_P001 | Maize | plastid | 59.3 | 54.75 |
| AT5G46180.1 | Thale cress | mitochondrion | 28.88 | 27.79 |
| AT4G39660.1 | Thale cress | mitochondrion | 26.91 | 25.84 |
| AT2G38400.2 | Thale cress | mitochondrion | 26.7 | 24.75 |
| AT3G08860.1 | Thale cress | mitochondrion | 25.38 | 24.12 |
| AT3G22200.2 | Thale cress | mitochondrion | 24.95 | 22.22 |
| AT3G48730.1 | Thale cress | plastid | 22.76 | 22.03 |
| AT5G63570.1 | Thale cress | plastid | 22.1 | 21.31 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:4.1.1.1.1.4 | EntrezGene:844399 | ProteinID:AAF27117.1 | ProteinID:AEE36426.1 |
| EMBL:AK220871 | ArrayExpress:AT1G80600 | EnsemblPlantsGene:AT1G80600 | RefSeq:AT1G80600 | TAIR:AT1G80600 | RefSeq:AT1G80600-TAIR-G |
| EnsemblPlants:AT1G80600.1 | TAIR:AT1G80600.1 | EMBL:AY054594 | EMBL:AY085912 | InterPro:AcOrn/SuccOrn_fam | InterPro:Aminotrans_3 |
| Unigene:At.46389 | EMBL:BT002584 | ncoils:Coil | EMBL:EU214908 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003992 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006525 | GO:GO:0006526 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030170 | GO:GO:0042742 | GO:GO:0042802 | GO:GO:0044419 |
| GO:GO:0048364 | GO:GO:0080022 | InterPro:IPR015421 | InterPro:IPR015422 | HAMAP:MF_01107 | RefSeq:NP_178175.1 |
| PFAM:PF00202 | PIRSF:PIRSF000521 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 | PO:PO:0025281 | ScanProsite:PS00600 | PANTHER:PTHR11986 |
| PANTHER:PTHR11986:SF79 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q9M8M7 | SUPFAM:SSF53383 |
| TIGRFAMs:TIGR00707 | UniParc:UPI00000ABF15 | Symbol:WIN1 | SEG:seg | : | : |
Description
WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
Coordinates
chr1:-:30298462..30300658
Molecular Weight (calculated)
48829.9 Da
IEP (calculated)
6.780
GRAVY (calculated)
0.122
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.