CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48868	Soybean	nucleus	91.36	90.58
GSMUA_Achr11P...	Banana	cytosol	59.83	75.48
GSMUA_Achr9P04450_001	Banana	cytosol	63.71	73.57
VIT_19s0027g01790.t01	Wine grape	plastid	70.41	69.81
PGSC0003DMT400058543	Potato	cytosol, plastid	68.9	69.8
Solyc08g080370.2.1	Tomato	plastid	68.9	69.35
Os05t0129100-00	Rice	plastid	48.6	69.02
Bra008453.1-P	Field mustard	plastid	66.31	68.53
CDY37615	Canola	mitochondrion	66.31	68.53
CDY67620	Canola	mitochondrion, plastid	66.09	68.3
Bra035168.1-P	Field mustard	mitochondrion	66.52	68.29
Os07t0461900-01	Rice	plastid	48.38	68.29
CDY39963	Canola	mitochondrion	66.31	68.07
CDX87325	Canola	mitochondrion	66.31	68.07
AT1G80600.1	Thale cress	plastid	66.95	67.83
GSMUA_Achr5P28220_001	Banana	cytosol	33.91	64.61
TraesCS1D01G074600.1	Wheat	plastid	63.28	63.7
TraesCS1A01G072200.1	Wheat	plastid	62.85	63.68
TraesCS1B01G090600.1	Wheat	plastid	62.85	63.26
EES17651	Sorghum	plastid	60.91	60.52
HORVU1Hr1G015560.5	Barley	plastid	62.85	56.84
Zm00001d035443_P001	Maize	plastid	58.75	54.95
CDY68670	Canola	cytosol	49.46	51.35
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	49.68	47.03
KRH58670	Soybean	mitochondrion	30.02	29.64
KRH42566	Soybean	mitochondrion	29.59	29.34
KRH45041	Soybean	extracellular, mitochondrion	9.29	28.86
KRH04754	Soybean	cytosol	8.21	27.94
KRH65497	Soybean	mitochondrion	27.43	26.74
KRH76075	Soybean	mitochondrion	27.43	26.74
KRH00394	Soybean	mitochondrion	27.43	26.35
KRH43286	Soybean	mitochondrion	26.78	26.11
KRH59427	Soybean	mitochondrion	26.78	26.0
KRH31231	Soybean	mitochondrion	25.49	24.95
KRG97644	Soybean	mitochondrion	19.22	22.88
KRH24110	Soybean	mitochondrion	25.27	22.81
KRH29085	Soybean	cytosol	25.27	22.08
KRH60678	Soybean	nucleus	21.81	21.49
KRH51376	Soybean	plastid	21.6	21.46
KRH17479	Soybean	plastid	16.2	18.07

Protein Annotations

EntrezGene:100798293	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	EMBL:ACUP02006696	InterPro:AcOrn/SuccOrn_fam
InterPro:Aminotrans_3	EnsemblPlantsGene:GLYMA_10G255400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006525	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	GO:GO:0042802	UniProt:I1LEC3	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH35638
ProteinID:KRH35638	ProteinID:KRH35638.1	ProteinID:KRH35639.1	HAMAP:MF_01107	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TIGRFAMs:TIGR00707	UniParc:UPI0001CABD91	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:48232572..48236629

Molecular Weight (calculated)

49941.4 Da

IEP (calculated)

6.910

GRAVY (calculated)

0.078

Length

463 amino acids

Sequence
(BLAST)

001: MGAVYFSQSC YKPRQIFNLE RESTLVGRCP VVQIRCRRVV SACLNVDVDA PNTGNTTSEK KKTKDVIEME GMYLVGTYAR TPVVLERGEG CKLYDVEGNE
101: YLDLSAGIAV NALGHGDADW LKAVVEQAGT LTHTSNIFHT IPQVELAKRL VASSFADRVF FANSGTEANE AAIKFARKYQ RHTTSNGKVP ATEFIAFSNC
201: FHGRTLGALA LTSKVQYRMP FEPVMPGVTF LEYGNAQAAV ELIKQGKIAA VFVEPIQGEG GIYSATKEFL QSLRNACDET GALLVFDEVQ CGLGRSGFLW
301: AHEAYGVFPD MMTLAKPLAG GLPIGALLVT ERVASAINYG DHGSTFAGSP LVCSAALAVL DKISKPDFLS SVSKKGLYFK ELLREKLGEN RHVKEIRGVG
401: LIIGIDLDVP ASPLVDACRS SGLLVLTAGK GNVVRLVPPL IITEKELEQA AGILCQTLPV LDN

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.