Factsheet for PGSC0003DMT400076803

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 2
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45041	Soybean	extracellular, mitochondrion	41.77	69.8
KRH04754	Soybean	cytosol	37.75	69.12
Solyc08g048450.2.1	Tomato	cytosol, plastid	96.39	56.47
VIT_10s0003g03870.t01	Wine grape	mitochondrion	77.91	41.63
CDY33459	Canola	mitochondrion	68.27	39.81
CDX77642	Canola	mitochondrion	67.07	39.2
EER91172	Sorghum	mitochondrion	71.49	37.95
KRH58670	Soybean	mitochondrion	71.08	37.74
KRH42566	Soybean	mitochondrion	70.68	37.69
GSMUA_Achr10P...	Banana	mitochondrion	71.49	37.55
TraesCS5B01G376900.1	Wheat	mitochondrion	70.28	37.39
TraesCS5D01G384500.1	Wheat	mitochondrion	70.68	37.21
Bra025033.1-P	Field mustard	mitochondrion	71.08	37.11
TraesCS5A01G375000.1	Wheat	mitochondrion	70.28	37.08
AT5G46180.1	Thale cress	mitochondrion	70.28	36.84
HORVU5Hr1G092960.5	Barley	cytosol	69.88	36.79
Os03t0643300-02	Rice	mitochondrion	69.48	36.58
Zm00001d033228_P002	Maize	mitochondrion	69.88	35.66
CDY03236	Canola	cytosol	52.61	34.03
Bra017570.1-P	Field mustard	mitochondrion	38.96	33.45
CDY35151	Canola	mitochondrion	44.58	29.13
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	26.1	21.24
PGSC0003DMT400058543	Potato	cytosol, plastid	27.31	14.88
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	27.71	14.44
PGSC0003DMT400064961	Potato	cytosol	25.7	13.97
PGSC0003DMT400033328	Potato	extracellular	25.3	13.32
PGSC0003DMT400062372	Potato	plastid	26.1	12.6
PGSC0003DMT400030683	Potato	mitochondrion	24.9	12.04
PGSC0003DMT400082447	Potato	cytosol	21.69	11.23

Protein Annotations

KEGG:00330+2.6.1.13	Gene3D:3.40.640.10	MapMan:50.2.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004587	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006561	GO:GO:0006593	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008483	GO:GO:0009056	GO:GO:0009058	GO:GO:0009408
GO:GO:0009413	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009741	GO:GO:0009753	GO:GO:0009816
GO:GO:0009987	GO:GO:0016740	GO:GO:0019544	GO:GO:0030170	GO:GO:0042538	GO:GO:0051646
InterPro:IPR015421	UniProt:M1CXE9	InterPro:Orn_aminotrans_mito	PFAM:PF00202	EnsemblPlantsGene:PGSC0003DMG400029872	PGSC:PGSC0003DMG400029872
EnsemblPlants:PGSC0003DMT400076803	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF18	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000295AE2B	:	:	:	:

Description

Ornithine aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400029872]

Coordinates

chr8:+:13625895..13632352

Molecular Weight (calculated)

27178.3 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.007

Length

249 amino acids

Sequence
(BLAST)

001: MLPHNICLTL QVIIPPEGYL KAVRDLCSKY NILMIADEIQ SGLARSGRLL ACDWEEVRPD VVILGKALGG GVLPVSAVLA DKDVMLCIQA GEHGSTFGGN
101: PLASAVAIAS LDVIRDEGLA ERSAQMGEQL RHQLIKIQRQ FPHFIKEVRG KGLFNAVELN SKSLLPVTAY DICMKLKERG ILAKPTHDSI IRLTPPLSMS
201: LEELQEGSNA LHDVLVHDLP KMQKEKPARV SHATSNVCDR CGRDLYGSS

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.