Factsheet for VIT_10s0003g03870.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g048450.2.1	Tomato	cytosol, plastid	72.75	79.76
PGSC0003DMT400076803	Potato	cytosol, extracellular, mitochondrion	41.63	77.91
Bra025033.1-P	Field mustard	mitochondrion	75.75	74.0
AT5G46180.1	Thale cress	mitochondrion	75.32	73.89
KRH58670	Soybean	mitochondrion	74.25	73.77
KRH42566	Soybean	mitochondrion	73.39	73.23
KRH45041	Soybean	extracellular, mitochondrion	23.39	73.15
GSMUA_Achr10P...	Banana	mitochondrion	73.18	71.94
CDX77642	Canola	mitochondrion	65.45	71.6
CDY33459	Canola	mitochondrion	65.02	70.96
KRH04754	Soybean	cytosol	20.6	70.59
TraesCS5B01G376900.1	Wheat	mitochondrion	70.39	70.09
TraesCS5D01G384500.1	Wheat	mitochondrion	71.03	69.98
EER91172	Sorghum	mitochondrion	70.39	69.94
Os03t0643300-02	Rice	mitochondrion	70.6	69.56
TraesCS5A01G375000.1	Wheat	mitochondrion	70.39	69.49
HORVU5Hr1G092960.5	Barley	cytosol	68.45	67.44
Bra017570.1-P	Field mustard	mitochondrion	41.42	66.55
Zm00001d033228_P002	Maize	mitochondrion	69.53	66.39
CDY35151	Canola	mitochondrion	52.36	64.04
CDY03236	Canola	cytosol	43.78	52.99
VIT_09s0002g08670.t01	Wine grape	plastid	29.83	30.02
VIT_19s0027g01790.t01	Wine grape	plastid	29.4	29.34
VIT_06s0004g07660.t01	Wine grape	mitochondrion	26.82	26.15
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	25.54	24.95
VIT_07s0031g01330.t01	Wine grape	mitochondrion	24.25	23.94
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	23.39	22.11
VIT_17s0000g00900.t01	Wine grape	plastid	22.1	21.78
VIT_03s0017g01760.t01	Wine grape	mitochondrion	23.61	20.87

Protein Annotations

KEGG:00330+2.6.1.13	EntrezGene:100233101	wikigene:100233101	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.4.2.2
ProteinID:AAG09278	ProteinID:AAG09278.1	EMBL:AF177590	EMBL:AM435047	InterPro:Aminotrans_3	ProteinID:CAN73779
ProteinID:CAN73779.1	ProteinID:CBI30927	ProteinID:CBI30927.3	UniProt:D7TKA5	EMBL:FN595992	GO:GO:0003674
GO:GO:0003824	GO:GO:0004587	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006561	GO:GO:0006593	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008483	GO:GO:0009056
GO:GO:0009058	GO:GO:0009408	GO:GO:0009413	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009741
GO:GO:0009753	GO:GO:0009816	GO:GO:0009987	GO:GO:0016740	GO:GO:0019544	GO:GO:0030170
GO:GO:0042538	GO:GO:0042802	GO:GO:0051646	InterPro:IPR015421	InterPro:IPR015422	EntrezGene:LOC100233101
wikigene:LOC100233101	InterPro:Orn_aminotrans	InterPro:Orn_aminotrans_mito	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600
PANTHER:PTHR11986	PANTHER:PTHR11986:SF18	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
TIGR:TC67021	TIGRFAMs:TIGR01885	UniParc:UPI00019842CB	ArrayExpress:VIT_10s0003g03870	EnsemblPlantsGene:VIT_10s0003g03870	EnsemblPlants:VIT_10s0003g03870.t01
unigene:Vvi.21	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:6611495..6637173

Molecular Weight (calculated)

51332.2 Da

IEP (calculated)

7.060

GRAVY (calculated)

-0.130

Length

466 amino acids

Sequence
(BLAST)

001: MALATRRFFN TICRGTRSFG ALPEGIPSSS QHLINLEYEY SAHNYHPIPI VFSQAKGSTI WDPEGKKYLD FLSAYSAVNQ GHCHPKVLKA LVEQAERLTL
101: SSRAFYNDRF PIFAERLKNM FGYDMVLPMN TGAEGVETAL KLARKWGYEK KKIPKDQAII VSCCGCFHGR TLAVISMSCD NEATRGFGPL LPGHLKVDFG
201: DEVALEKIFE ENGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCSKFNI LMIADEIQSG LGRSGRMLAC DWAEVRPDVV ILGKALGGGV IAVSAVLADK
301: DVMLSIQPGE HGSTFGGNPL ASAVAVASLD VITEEGLSER SDQMGQELRN QLMKIHQLFP NLIKEVRGKG LFNAVELNSK VLFPVSAYDI CLKLKERGVL
401: AKPTHDTIIR LTPPLSISLD ELQEGSNALR DVMEFDVPKM QKAKHKRVPQ TTTNICDRCG RNMDDS

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.