CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021225_P002	Maize	cytosol	92.57	92.57
TraesCS5D01G319600.1	Wheat	cytosol, nucleus, plastid	80.0	81.87
TraesCS5B01G313800.1	Wheat	cytosol, nucleus, plastid	80.0	81.87
TraesCS5A01G312800.1	Wheat	cytosol, nucleus, plastid	80.0	81.87
HORVU5Hr1G080540.5	Barley	nucleus	74.86	76.16
EES11283	Sorghum	nucleus	45.71	32.39
OQU80744	Sorghum	mitochondrion	24.57	29.86
KXG19166	Sorghum	nucleus	45.14	29.04
KXG40075	Sorghum	cytosol	41.14	28.92
EER97094	Sorghum	nucleus	34.29	18.52
EES15239	Sorghum	nucleus	32.57	18.15
OQU87370	Sorghum	nucleus	23.43	11.75
OQU80147	Sorghum	nucleus	23.43	11.45
EES12797	Sorghum	nucleus	23.43	10.96
EES18624	Sorghum	cytosol, mitochondrion, nucleus, plastid	23.43	10.9
EES04530	Sorghum	nucleus	25.14	8.49
EES19093	Sorghum	nucleus	25.71	8.36
EES00281	Sorghum	nucleus	24.57	8.35
KXG22536	Sorghum	nucleus	22.86	7.87
EES03404	Sorghum	nucleus	23.43	7.87
EES11547	Sorghum	nucleus	24.57	6.52
KXG20741	Sorghum	nucleus	21.71	6.44
EES10483	Sorghum	nucleus	24.57	6.18

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:8054875	UniProt:C5X634	EnsemblPlants:EER99218	ProteinID:EER99218
ProteinID:EER99218.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0048437	GO:GO:0061630
InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF150
SMART:SM00184	EnsemblPlantsGene:SORBI_3002G270300	SUPFAM:SSF57850	UniParc:UPI0001A83CFB	RefSeq:XP_002462697.1	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:65399993..65404250

Molecular Weight (calculated)

19843.2 Da

IEP (calculated)

5.325

GRAVY (calculated)

-0.587

Length

175 amino acids

Sequence
(BLAST)

001: MATHTTYSVR VSSETHKIEA WVVSDEALAR QLQEEENTHD AAADTREFAG NVSLELSSPA VEYRPTQNAA QVAREDNVDP DNMSYEQLQA LGEAVGTQSR
101: GLSDELIAYL EPFRNKCTFF SRKKNSEECV ICKTTYKSRQ RMIRLPCSHC YHADCITRWL KINKACPICN EEVFG

Best Arabidopsis Sequence Match ( AT3G63530.1 )
(BLAST)

001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH

Arabidopsis Description

BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.