CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011541_P004	Maize	nucleus	91.55	90.0
Os01t0667700-02	Rice	nucleus	73.13	72.71
TraesCS3B01G272400.4	Wheat	nucleus	73.13	72.16
HORVU3Hr1G061010.4	Barley	nucleus	72.74	72.05
TraesCS3D01G244600.1	Wheat	nucleus	72.74	71.78
TraesCS3A01G246900.3	Wheat	nucleus	72.17	71.35
KXG22536	Sorghum	nucleus	49.71	50.98
OQU80744	Sorghum	mitochondrion	7.29	26.39
VIT_19s0014g01850.t01	Wine grape	nucleus	24.95	24.16
Solyc12g014070.1.1	Tomato	nucleus	24.38	23.74
PGSC0003DMT400039631	Potato	nucleus	24.38	23.69
VIT_03s0088g00930.t01	Wine grape	nucleus, plastid	17.85	23.66
EER99218	Sorghum	nucleus	7.87	23.43
KRH26195	Soybean	nucleus	19.96	22.71
VIT_03s0097g00680.t01	Wine grape	nucleus	18.23	22.57
KRH55161	Soybean	nucleus	19.39	22.05
VIT_03s0088g01090.t01	Wine grape	nucleus	19.0	21.66
KRH30071	Soybean	cytosol	14.2	21.51
OQU80147	Sorghum	nucleus	14.78	21.51
KRH22017	Soybean	nucleus	21.69	21.4
KXG40075	Sorghum	cytosol	10.17	21.29
CDY26006	Canola	nucleus	18.81	21.21
OQU87370	Sorghum	nucleus	14.2	21.2
EES12797	Sorghum	nucleus	15.16	21.12
CDY24110	Canola	nucleus	18.43	20.87
Bra039659.1-P	Field mustard	nucleus	18.43	20.87
AT1G53190.1	Thale cress	nucleus	19.77	20.85
EES11283	Sorghum	nucleus	9.79	20.65
PGSC0003DMT400054921	Potato	nucleus	20.54	20.62
KRH55165	Soybean	nucleus	12.28	20.58
EES18624	Sorghum	cytosol, mitochondrion, nucleus, plastid	14.78	20.48
Solyc10g007140.2.1	Tomato	nucleus	20.15	20.23
KXG19166	Sorghum	nucleus	10.56	20.22
CDY68521	Canola	nucleus	16.89	19.95
CDX82450	Canola	nucleus	17.08	19.87
AT3G15070.1	Thale cress	nucleus	18.43	19.75
CDX75805	Canola	cytosol	16.7	19.64
CDX97629	Canola	nucleus	16.51	19.5
Bra001582.1-P	Field mustard	nucleus	16.31	19.45
Bra027282.1-P	Field mustard	nucleus	16.51	19.33
CDY25871	Canola	nucleus	17.47	19.04
Bra038109.1-P	Field mustard	nucleus	17.47	18.96
CDY55839	Canola	nucleus	17.66	18.81
KRH55090	Soybean	nucleus	13.24	18.55
EES19093	Sorghum	nucleus	17.66	17.1
EES00281	Sorghum	nucleus	16.89	17.09
EES04530	Sorghum	nucleus	16.31	16.41
EER97094	Sorghum	nucleus	9.6	15.43
EES15239	Sorghum	nucleus	9.21	15.29
EES11547	Sorghum	nucleus	19.0	15.0
EES10483	Sorghum	nucleus	19.39	14.51
KXG20741	Sorghum	nucleus	15.74	13.9
Solyc07g062720.1.1	Tomato	nucleus	19.77	13.29
PGSC0003DMT400032385	Potato	nucleus	20.54	13.18

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:8061836	UniProt:C5XG08	EnsemblPlants:EES03404	ProteinID:EES03404
ProteinID:EES03404.1	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0042787
GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639	PFscan:PS50089
PANTHER:PTHR22937	PANTHER:PTHR22937:SF67	SMART:SM00184	EnsemblPlantsGene:SORBI_3003G250400	SUPFAM:SSF57850	unigene:Sbi.11268
UniParc:UPI0001A84A98	RefSeq:XP_002458284.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:58873376..58876496

Molecular Weight (calculated)

57063.4 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.570

Length

521 amino acids

Sequence
(BLAST)

001: MAFRNMVCTP QVIDLTSERG QAQGGNGSEI PEQGAQHAVR VVGNGTNVGL SGVRSYYDVS INHHHQPVHN PPPNLGVDSG FVFASNMYNP CMSSTSINRH
101: VSHAQSFGSG NQTLPLNQVP GSMDESSRND SVGESARDHI KRKNAAVAGS YPFVNGFASS SSSSHAPQNP MLRPWDPSFE STVSSNVAPF NPSEYHGHSS
201: WPSLEGSSIA GTNGFNSMAV HPESVQRGNY TFPSNHIGHS WMPHATNGIA DGVPQWEYVN ATTNIQGRFA HSGATEIANG GFQEYQNGPS TVSRGPVPYF
301: HQHAMHGMQA HNLLDPTQMQ VPYQQCHNNG VLHGGVNYPG NRLHLGPRIP VLFSSPERTF GPPQHPFLAN PVNHRNIRIL PPEQHATIMD FSRLYEVSNT
401: VDEHRDMRLD IDSMTYEELL ALEEQIGDVN TGLTKSHIVD KLRTSLYVPG TSSMPDQPSK SSLENDACII CQEEYQARDC VGTLDCGHRY HAECVKQWLM
501: VKNLCPICKT TALSANRRQG K

Best Arabidopsis Sequence Match ( AT3G15070.2 )
(BLAST)

001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR

Arabidopsis Description

At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.