Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 82.49 | 95.93 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 87.31 | 94.77 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 86.0 | 73.05 |
| VIT_16s0022g00290.t01 | Wine grape | nucleus | 6.78 | 40.79 |
| KRH55161 | Soybean | nucleus | 37.86 | 37.77 |
| KRH26195 | Soybean | nucleus | 37.42 | 37.34 |
| Solyc12g014070.1.1 | Tomato | nucleus | 42.23 | 36.07 |
| KRH30071 | Soybean | cytosol | 27.13 | 36.05 |
| VIT_07s0031g00380.t01 | Wine grape | cytosol | 5.47 | 35.71 |
| PGSC0003DMT400039631 | Potato | nucleus | 41.79 | 35.63 |
| KRH22017 | Soybean | nucleus | 40.26 | 34.85 |
| VIT_07s0031g00400.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 7.44 | 33.33 |
| Solyc10g007140.2.1 | Tomato | nucleus | 36.54 | 32.18 |
| PGSC0003DMT400054921 | Potato | nucleus | 36.1 | 31.79 |
| KRH55165 | Soybean | nucleus | 21.44 | 31.51 |
| KRH55090 | Soybean | nucleus | 24.95 | 30.65 |
| CDY26006 | Canola | nucleus | 28.45 | 28.14 |
| AT1G53190.1 | Thale cress | nucleus | 30.42 | 28.14 |
| VIT_07s0031g00370.t01 | Wine grape | mitochondrion | 8.75 | 27.59 |
| CDX97629 | Canola | nucleus | 26.48 | 27.44 |
| CDY24110 | Canola | nucleus | 27.57 | 27.39 |
| Bra039659.1-P | Field mustard | nucleus | 27.57 | 27.39 |
| AT3G15070.1 | Thale cress | nucleus | 29.1 | 27.37 |
| CDY25871 | Canola | nucleus | 28.45 | 27.2 |
| CDX75805 | Canola | cytosol | 26.26 | 27.09 |
| Bra038109.1-P | Field mustard | nucleus | 28.45 | 27.08 |
| Bra001582.1-P | Field mustard | nucleus | 25.82 | 27.0 |
| CDY68521 | Canola | nucleus | 25.82 | 26.76 |
| CDX82450 | Canola | nucleus | 26.04 | 26.56 |
| Bra027282.1-P | Field mustard | nucleus | 25.82 | 26.52 |
| CDY55839 | Canola | nucleus | 28.23 | 26.38 |
| VIT_11s0118g00640.t01 | Wine grape | nucleus | 6.35 | 24.37 |
| VIT_07s0031g00440.t01 | Wine grape | nucleus | 10.28 | 21.36 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 24.29 | 20.33 |
| Solyc07g062720.1.1 | Tomato | nucleus | 33.04 | 19.48 |
| EES03404 | Sorghum | nucleus | 21.66 | 19.0 |
| PGSC0003DMT400032385 | Potato | nucleus | 33.7 | 18.97 |
| Os01t0667700-02 | Rice | nucleus | 21.44 | 18.7 |
| VIT_07s0031g00390.t01 | Wine grape | nucleus | 9.85 | 18.44 |
| Os05t0564300-01 | Rice | nucleus | 19.69 | 18.0 |
| Zm00001d011541_P004 | Maize | nucleus | 20.79 | 17.92 |
| VIT_18s0001g02280.t01 | Wine grape | nucleus | 8.1 | 17.87 |
| KXG22536 | Sorghum | nucleus | 19.04 | 17.13 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 19.69 | 17.08 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 19.69 | 17.05 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 19.69 | 17.05 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 19.47 | 16.92 |
| VIT_13s0019g04100.t01 | Wine grape | extracellular | 20.79 | 16.81 |
| Zm00001d009571_P002 | Maize | nucleus | 18.82 | 16.8 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 7.88 | 16.44 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 12.47 | 16.24 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 17.94 | 15.77 |
| VIT_06s0004g01930.t01 | Wine grape | nucleus | 8.53 | 15.48 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 18.16 | 15.4 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 12.47 | 15.36 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 17.29 | 15.08 |
| VIT_13s0064g01030.t01 | Wine grape | nucleus | 8.1 | 14.98 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 17.94 | 14.96 |
| VIT_18s0001g10260.t01 | Wine grape | nucleus | 23.85 | 14.85 |
| Zm00001d039015_P002 | Maize | cytosol | 12.69 | 14.18 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 8.97 | 13.31 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 21.01 | 13.08 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 14.0 | 11.64 |
Protein Annotations
| EntrezGene:100251458 | wikigene:100251458 | EntrezGene:100258411 | wikigene:100258411 | EntrezGene:104878839 | Gene3D:3.30.40.10 |
| MapMan:35.1 | EMBL:AM439427 | EMBL:AM467672 | ProteinID:CAN62955 | ProteinID:CAN62955.1 | ProteinID:CAN83485 |
| ProteinID:CAN83485.1 | ProteinID:CCB49600 | ProteinID:CCB49600.1 | UniProt:F6HBK1 | EMBL:FN595512 | InterPro:IPR001841 |
| InterPro:IPR013083 | EntrezGene:LOC100251458 | wikigene:LOC100251458 | EntrezGene:LOC100258411 | wikigene:LOC100258411 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002108A47 |
| ArrayExpress:VIT_03s0088g01090 | EnsemblPlantsGene:VIT_03s0088g01090 | EnsemblPlants:VIT_03s0088g01090.t01 | RefSeq:XP_002269031 | RefSeq:XP_002269031.1 | RefSeq:XP_002269505 |
| RefSeq:XP_002269505.1 | RefSeq:XP_010647987.2 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chr3:+:9340156..9341562
Molecular Weight (calculated)
49837.1 Da
IEP (calculated)
7.207
GRAVY (calculated)
-0.556
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSAPENSSH FDAPHLPQHY DGSAMFYGIR LHHPLPSLDI AVAPRSNIYD PYSTPSSGYR GFPVSMNHGP SGQLPSSSNH GVIGVSTYER KNAQGILGNF
101: QYFNGFASSS SSAPPFNTWH LESGIPVMDS ASLAFAQPQY RGNNAPSIME VGSHRSVRNR SGGVGQDSVL AHNHYHLVQG NYIGHPFQPS GNPWVDQQSG
201: NNGSGGGTLA WNHGPALPYL HGSNISGGSR EARNVGIQGY HDTSSARSST DYLQPPVLHR HHNLHYPPPQ PMQGARRHFL PQVVASSYRL ATISSRSPVP
301: PQVGVEAGHR HPGPVPPTWI RIDRSHRGGV APEATSRHGN LPYLRTLPEE EVAILDLSAS YQVGEVSTGL SEESITNCLK TRTYISSTCL NLEEGASMDQ
401: EKDSCIICQE EYENEEKIGF LDCGHEYHAD CLKKWVLVKN VCPLCRAPAM TPKKKDV
101: QYFNGFASSS SSAPPFNTWH LESGIPVMDS ASLAFAQPQY RGNNAPSIME VGSHRSVRNR SGGVGQDSVL AHNHYHLVQG NYIGHPFQPS GNPWVDQQSG
201: NNGSGGGTLA WNHGPALPYL HGSNISGGSR EARNVGIQGY HDTSSARSST DYLQPPVLHR HHNLHYPPPQ PMQGARRHFL PQVVASSYRL ATISSRSPVP
301: PQVGVEAGHR HPGPVPPTWI RIDRSHRGGV APEATSRHGN LPYLRTLPEE EVAILDLSAS YQVGEVSTGL SEESITNCLK TRTYISSTCL NLEEGASMDQ
401: EKDSCIICQE EYENEEKIGF LDCGHEYHAD CLKKWVLVKN VCPLCRAPAM TPKKKDV
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.