Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027282.1-P | Field mustard | nucleus | 90.93 | 90.11 |
| CDY68521 | Canola | nucleus | 87.3 | 87.3 |
| AT3G15070.1 | Thale cress | nucleus | 70.29 | 63.79 |
| CDX75805 | Canola | cytosol | 63.72 | 63.43 |
| CDX82450 | Canola | nucleus | 63.72 | 62.72 |
| CDY26006 | Canola | nucleus | 45.8 | 43.72 |
| CDY24110 | Canola | nucleus | 45.58 | 43.7 |
| CDY25871 | Canola | nucleus | 45.58 | 42.05 |
| CDY55839 | Canola | nucleus | 46.03 | 41.51 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 36.28 | 29.74 |
| KRH30071 | Soybean | cytosol | 22.45 | 28.78 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 26.3 | 27.55 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 24.49 | 27.48 |
| KRH55161 | Soybean | nucleus | 27.89 | 26.86 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 27.44 | 26.48 |
| KRH55165 | Soybean | nucleus | 18.59 | 26.37 |
| KRH26195 | Soybean | nucleus | 26.98 | 25.98 |
| KRH22017 | Soybean | nucleus | 28.8 | 24.05 |
| CDY13429 | Canola | cytosol | 14.06 | 24.03 |
| Solyc12g014070.1.1 | Tomato | nucleus | 29.02 | 23.93 |
| KRH55090 | Soybean | nucleus | 19.95 | 23.66 |
| Solyc10g007140.2.1 | Tomato | nucleus | 27.44 | 23.31 |
| PGSC0003DMT400039631 | Potato | nucleus | 28.12 | 23.13 |
| PGSC0003DMT400054921 | Potato | nucleus | 26.98 | 22.93 |
| CDX93901 | Canola | nucleus | 11.56 | 21.25 |
| CDY53710 | Canola | nucleus | 11.56 | 21.07 |
| CDX77848 | Canola | nucleus | 9.52 | 19.81 |
| CDY67192 | Canola | nucleus | 9.52 | 19.72 |
| CDX97032 | Canola | plastid | 14.97 | 19.7 |
| CDX68213 | Canola | nucleus, plastid | 15.19 | 19.2 |
| CDY71882 | Canola | plastid | 15.19 | 19.14 |
| CDY27083 | Canola | nucleus | 9.3 | 18.72 |
| CDY11092 | Canola | cytosol, plastid | 14.51 | 18.39 |
| CDX91624 | Canola | nucleus | 9.07 | 18.18 |
| CDY60141 | Canola | plastid | 14.51 | 17.93 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 21.32 | 17.87 |
| CDY00512 | Canola | nucleus | 10.88 | 17.58 |
| CDX73013 | Canola | plastid | 14.06 | 17.46 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.86 | 17.42 |
| CDX83878 | Canola | nucleus | 14.06 | 17.37 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.63 | 17.23 |
| CDY31919 | Canola | nucleus | 10.66 | 17.22 |
| CDX85750 | Canola | nucleus | 14.97 | 17.1 |
| CDX96741 | Canola | nucleus | 14.06 | 17.03 |
| Os01t0667700-02 | Rice | nucleus | 20.18 | 16.98 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.18 | 16.89 |
| CDY32973 | Canola | nucleus | 15.65 | 16.83 |
| CDX79718 | Canola | nucleus | 19.95 | 16.57 |
| EES03404 | Sorghum | nucleus | 19.5 | 16.51 |
| Os05t0564300-01 | Rice | nucleus | 18.59 | 16.4 |
| CDY43590 | Canola | nucleus | 15.42 | 16.15 |
| KXG22536 | Sorghum | nucleus | 18.59 | 16.14 |
| Zm00001d011541_P004 | Maize | nucleus | 18.82 | 15.66 |
| CDY55435 | Canola | nucleus | 18.59 | 15.53 |
| Zm00001d009571_P002 | Maize | nucleus | 17.91 | 15.43 |
| CDY63645 | Canola | nucleus | 16.1 | 15.37 |
| CDX95473 | Canola | nucleus | 16.1 | 15.3 |
| CDY68424 | Canola | nucleus | 18.59 | 15.27 |
| CDY46757 | Canola | nucleus | 18.37 | 15.2 |
| CDY68658 | Canola | nucleus | 16.1 | 15.14 |
| CDY13433 | Canola | nucleus | 15.87 | 15.02 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 17.69 | 15.0 |
| CDX78393 | Canola | nucleus | 16.78 | 14.98 |
| CDX70363 | Canola | nucleus | 16.33 | 14.81 |
| CDX91625 | Canola | cytosol | 7.48 | 14.41 |
| CDX88140 | Canola | nucleus | 15.65 | 14.32 |
| CDX97044 | Canola | nucleus | 16.55 | 14.31 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 17.01 | 14.31 |
| CDY17114 | Canola | nucleus | 17.01 | 14.12 |
| CDY25357 | Canola | nucleus | 10.2 | 14.06 |
| CDY24595 | Canola | nucleus | 9.98 | 13.97 |
| CDX69813 | Canola | mitochondrion | 16.55 | 13.7 |
| CDY33429 | Canola | nucleus | 10.2 | 13.64 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 16.55 | 13.54 |
| CDY42218 | Canola | nucleus | 10.2 | 13.47 |
| CDY40109 | Canola | nucleus | 5.67 | 13.44 |
| Solyc07g062720.1.1 | Tomato | nucleus | 23.58 | 13.42 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 16.55 | 13.32 |
| PGSC0003DMT400032385 | Potato | nucleus | 24.04 | 13.05 |
| CDY22376 | Canola | nucleus | 18.14 | 13.01 |
| CDY43220 | Canola | nucleus | 17.46 | 12.64 |
| CDY27082 | Canola | cytosol | 6.8 | 12.61 |
| CDY37230 | Canola | nucleus | 16.78 | 12.56 |
| CDY17061 | Canola | nucleus | 17.23 | 12.54 |
| CDY62314 | Canola | nucleus | 16.55 | 12.33 |
| CDX71531 | Canola | nucleus | 17.23 | 11.93 |
| Zm00001d039015_P002 | Maize | cytosol | 10.66 | 11.49 |
| CDY47948 | Canola | nucleus | 7.26 | 6.36 |
| CDY69560 | Canola | nucleus | 6.8 | 5.89 |
| CDY36635 | Canola | nucleus | 6.8 | 5.03 |
Protein Annotations
| EnsemblPlants:CDX97629 | EnsemblPlantsGene:GSBRNA2T00104855001 | Gene3D:3.30.40.10 | GO:A0A078EA77 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX97629 | ProteinID:CDX97629.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE194A |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA05g24500D
Coordinates
chrLK031900:-:701594..704903
Molecular Weight (calculated)
49763.0 Da
IEP (calculated)
6.773
GRAVY (calculated)
-0.734
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQRTMLTGL DMEQHSQTFG LPPEISVPDF EPYDNNNSML YGLQQSHHHQ RPSSFGPALS TPPHFHLRYA PFHAPPFAPG GTSTEHERDA HVMCQGYKRK
101: STQVMPGNFQ YQTTAEAPFP FPHYGPQPVD ERSVRNRAGA ATMDPPHGHN NFIQGSYPAH PFPPPGSVWY DQHCNGNISD GSSSSLWPQP PSLPYMHGNF
201: ATGSIDSGNV CFPRYHETSR SRNHTPFVYP RHNHFSHHPA PPPPPHLPHM ALASYTIHDP SYSHVGPVQS TGCRINPQHP LDDFVPAATL RLPRFRAFPT
301: YEVAVFREGG YYDAVDYVDH HQDMRLDIED MSYEELLALS DHIGTVKTGI SEEDAKGFLK RRTSLWTRIN LEEAPSTDLE TDSCTICQEN YKNQDKIATL
401: DCRHEYHAEC LKKWLVIKNI CPVCKSEALG HGKEQGTIKS L
101: STQVMPGNFQ YQTTAEAPFP FPHYGPQPVD ERSVRNRAGA ATMDPPHGHN NFIQGSYPAH PFPPPGSVWY DQHCNGNISD GSSSSLWPQP PSLPYMHGNF
201: ATGSIDSGNV CFPRYHETSR SRNHTPFVYP RHNHFSHHPA PPPPPHLPHM ALASYTIHDP SYSHVGPVQS TGCRINPQHP LDDFVPAATL RLPRFRAFPT
301: YEVAVFREGG YYDAVDYVDH HQDMRLDIED MSYEELLALS DHIGTVKTGI SEEDAKGFLK RRTSLWTRIN LEEAPSTDLE TDSCTICQEN YKNQDKIATL
401: DCRHEYHAEC LKKWLVIKNI CPVCKSEALG HGKEQGTIKS L
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.