Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036336.1-P | Field mustard | nucleus | 99.4 | 99.4 |
| CDY17114 | Canola | nucleus | 73.96 | 70.06 |
| CDY43220 | Canola | nucleus | 58.45 | 48.28 |
| CDY17061 | Canola | nucleus | 57.26 | 47.52 |
| CDY22376 | Canola | nucleus | 42.54 | 34.8 |
| CDX71531 | Canola | nucleus | 43.94 | 34.69 |
| CDY43590 | Canola | nucleus | 27.44 | 32.78 |
| CDY32973 | Canola | nucleus | 26.24 | 32.2 |
| CDY69560 | Canola | nucleus | 17.3 | 17.09 |
| CDY62314 | Canola | nucleus | 17.89 | 15.2 |
| CDY37230 | Canola | nucleus | 17.5 | 14.94 |
| CDY36635 | Canola | nucleus | 15.71 | 13.26 |
| KRH32434 | Soybean | nucleus | 12.52 | 11.69 |
| KRH19845 | Soybean | nucleus | 12.33 | 11.27 |
| KRH67668 | Soybean | nucleus | 11.93 | 10.89 |
| KRG95955 | Soybean | nucleus | 11.73 | 10.75 |
| CDX79718 | Canola | nucleus | 10.93 | 10.36 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 11.13 | 10.26 |
| CDY46757 | Canola | nucleus | 10.74 | 10.13 |
| Solyc09g007530.2.1 | Tomato | nucleus | 10.74 | 9.96 |
| PGSC0003DMT400004449 | Potato | nucleus | 10.54 | 9.78 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 9.94 | 9.77 |
| Os05t0163400-03 | Rice | nucleus | 10.14 | 9.57 |
| CDY68424 | Canola | nucleus | 10.14 | 9.5 |
| CDY71882 | Canola | plastid | 6.36 | 9.14 |
| TraesCS3D01G105300.1 | Wheat | cytosol | 9.34 | 9.07 |
| CDX97032 | Canola | plastid | 5.96 | 8.96 |
| EES00281 | Sorghum | nucleus | 9.15 | 8.93 |
| Zm00001d008649_P003 | Maize | cytosol | 9.34 | 8.92 |
| CDY55435 | Canola | nucleus | 9.34 | 8.9 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 9.15 | 8.86 |
| CDY33429 | Canola | nucleus | 5.77 | 8.79 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 9.34 | 8.75 |
| Zm00001d039769_P002 | Maize | cytosol | 9.54 | 8.71 |
| CDY42218 | Canola | nucleus | 5.77 | 8.68 |
| CDY40109 | Canola | nucleus | 3.18 | 8.6 |
| CDY24595 | Canola | nucleus | 5.37 | 8.57 |
| TraesCS3B01G120600.2 | Wheat | cytosol | 8.75 | 8.49 |
| CDY25357 | Canola | nucleus | 5.37 | 8.44 |
| TraesCS1B01G129600.1 | Wheat | nucleus | 8.95 | 8.43 |
| TraesCS1D01G111500.1 | Wheat | nucleus | 8.95 | 8.4 |
| Os01t0159300-01 | Rice | nucleus | 8.35 | 8.38 |
| CDX78393 | Canola | nucleus | 8.15 | 8.3 |
| CDX85750 | Canola | nucleus | 6.36 | 8.29 |
| TraesCS1A01G107600.1 | Wheat | nucleus | 8.75 | 8.19 |
| CDY25871 | Canola | nucleus | 7.75 | 8.16 |
| CDY26006 | Canola | nucleus | 7.36 | 8.01 |
| EES19093 | Sorghum | nucleus | 8.55 | 7.99 |
| CDX97044 | Canola | nucleus | 7.95 | 7.84 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 8.95 | 7.84 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 9.15 | 7.81 |
| CDY55839 | Canola | nucleus | 7.55 | 7.77 |
| CDX95473 | Canola | nucleus | 6.76 | 7.33 |
| CDX69813 | Canola | mitochondrion | 7.75 | 7.32 |
| CDX97629 | Canola | nucleus | 6.36 | 7.26 |
| CDX70363 | Canola | nucleus | 6.96 | 7.2 |
| CDY24110 | Canola | nucleus | 6.56 | 7.17 |
| CDX77848 | Canola | nucleus | 2.98 | 7.08 |
| CDY67192 | Canola | nucleus | 2.98 | 7.04 |
| CDY60141 | Canola | plastid | 4.97 | 7.0 |
| CDX88140 | Canola | nucleus | 6.56 | 6.85 |
| CDX75805 | Canola | cytosol | 5.96 | 6.77 |
| CDY68658 | Canola | nucleus | 6.16 | 6.61 |
| CDX73013 | Canola | plastid | 4.57 | 6.48 |
| CDX82450 | Canola | nucleus | 5.77 | 6.47 |
| CDY11092 | Canola | cytosol, plastid | 4.37 | 6.32 |
| CDY68521 | Canola | nucleus | 5.17 | 5.9 |
| CDX91624 | Canola | nucleus | 2.39 | 5.45 |
| CDX68213 | Canola | nucleus, plastid | 3.78 | 5.44 |
| CDX83878 | Canola | nucleus | 3.78 | 5.32 |
| CDY00512 | Canola | nucleus | 2.78 | 5.13 |
| CDY13429 | Canola | cytosol | 2.58 | 5.04 |
| CDY27083 | Canola | nucleus | 2.19 | 5.02 |
| CDY63645 | Canola | nucleus | 4.57 | 4.98 |
| CDX96741 | Canola | nucleus | 3.58 | 4.95 |
| CDY13433 | Canola | nucleus | 4.57 | 4.94 |
| CDY31919 | Canola | nucleus | 2.58 | 4.76 |
| CDX93901 | Canola | nucleus | 2.19 | 4.58 |
| CDY53710 | Canola | nucleus | 2.19 | 4.55 |
| CDX91625 | Canola | cytosol | 1.39 | 3.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 0.6 | 2.68 |
| CDY27082 | Canola | cytosol | 1.19 | 2.52 |
Protein Annotations
| EnsemblPlants:CDY47948 | EnsemblPlantsGene:GSBRNA2T00088564001 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF464 | ProteinID:CDY47948 | ProteinID:CDY47948.1 |
| SEG:seg | UniParc:UPI0004EED4F8 | UniProt:A0A078IFJ8 | MapMan:35.1 | : | : |
Description
BnaA10g28200DBnaA10g28200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFJ8]
Coordinates
chrLK032746:-:39981..42312
Molecular Weight (calculated)
54389.6 Da
IEP (calculated)
10.733
GRAVY (calculated)
-0.621
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGERSSIGS LPETLNFENG SSSTNPVVDQ QIRWGDRHSI GDNDLQNYMN TAADTTNTSF ANSVYPEQCD LHMFSLGEGS SSGAKNKAPT ITEKWMAIRH
101: LEELRNDKVE LNPLFMQPSS GANRVVGNLN AKHNGLESGL IPESGVRVGS GADGQHKRKA LDAGIGQSSS SNVGFRELHR GESSSLFSGK NDLNMSLNHG
201: PRGLGPGAVP NMSALPAIPE SSNRNFSVRA NPENVFAAGT VIRQPIAPSL SAPGDQQLVD LRYRHAFGNY TPLNPNASAG TIPPLSRNMI PPFQWNPVAA
301: AAGGSSSSAA PVVDRNVVHR VETRERSNML ANAWTSVQPS PSLTPYQNNS AQNQRRISEH LRRRSLLSSL ATHQRAARSS APPAPLDQHV LHQSGGDATF
401: QAQSRAYSRA VPRQGQQTTN GVSQSSRSLA STSRGRGRLA ELRNVLEQMR RTGTLHLEDV MLLNQSMLGA AGAVVSRRAD WRCLYRSQRG NHIKPIEATK
501: IQQ
101: LEELRNDKVE LNPLFMQPSS GANRVVGNLN AKHNGLESGL IPESGVRVGS GADGQHKRKA LDAGIGQSSS SNVGFRELHR GESSSLFSGK NDLNMSLNHG
201: PRGLGPGAVP NMSALPAIPE SSNRNFSVRA NPENVFAAGT VIRQPIAPSL SAPGDQQLVD LRYRHAFGNY TPLNPNASAG TIPPLSRNMI PPFQWNPVAA
301: AAGGSSSSAA PVVDRNVVHR VETRERSNML ANAWTSVQPS PSLTPYQNNS AQNQRRISEH LRRRSLLSSL ATHQRAARSS APPAPLDQHV LHQSGGDATF
401: QAQSRAYSRA VPRQGQQTTN GVSQSSRSLA STSRGRGRLA ELRNVLEQMR RTGTLHLEDV MLLNQSMLGA AGAVVSRRAD WRCLYRSQRG NHIKPIEATK
501: IQQ
001: MQGERASLGS LSKALNFERG STSSNAVVDQ QIRWENLHNY GDNDLQDYMS SAADTNPTFA NSVYHEKRGL QRFNIGEASS SGTKNEGASL TEQWKGIGRF
101: EEQRNDKLEL SPLFVQPSNG SRVVRDVNLN AEYNEHLEDM NPVTVHPGHF EVNGLRSEFL LDNSVRAGSS VDGRRASCKR KALDASGGQS SSTGGFREFQ
201: RGVSSSWISG PTYYSPAMTA NDLNISLDHG RRGLVSSAVP NLSPPTITES SSRNYPVWVN PTYQQETVSN FAPSLNSPGL IPADHQQISM RYGHALGNFA
301: SQNPNAPATH MPPVSRNTFQ WNTSPVAAVI SSSSATPVDR NVIHRNATRQ RSNTLEIPLF VPAPELRNVA HGHISRNASG ARHVASSSSR TSVQPSPSSP
401: ALTPYQNNSL HNQRRLSENF RRSLLSSLVT QQRAARSLAH PASPNEHVLQ SGGDNTSQVH NRASSRAGPR QGQDATGISH SLRGLASTSR GRTRMGASEI
501: RNILEHMRRA GNLRLEDVML LNQSIMLGAA DIHDRYRDMR LDVDNMTYEE LLSLEERIGD VCTGLNEETI SNRLKQQKYK SSTRSSQEVE PCCVCQEEYK
601: EEEEIGRLEC GHDFHSQCIK EWLKQKNLCP ICKTTGLNTA NKPQR
101: EEQRNDKLEL SPLFVQPSNG SRVVRDVNLN AEYNEHLEDM NPVTVHPGHF EVNGLRSEFL LDNSVRAGSS VDGRRASCKR KALDASGGQS SSTGGFREFQ
201: RGVSSSWISG PTYYSPAMTA NDLNISLDHG RRGLVSSAVP NLSPPTITES SSRNYPVWVN PTYQQETVSN FAPSLNSPGL IPADHQQISM RYGHALGNFA
301: SQNPNAPATH MPPVSRNTFQ WNTSPVAAVI SSSSATPVDR NVIHRNATRQ RSNTLEIPLF VPAPELRNVA HGHISRNASG ARHVASSSSR TSVQPSPSSP
401: ALTPYQNNSL HNQRRLSENF RRSLLSSLVT QQRAARSLAH PASPNEHVLQ SGGDNTSQVH NRASSRAGPR QGQDATGISH SLRGLASTSR GRTRMGASEI
501: RNILEHMRRA GNLRLEDVML LNQSIMLGAA DIHDRYRDMR LDVDNMTYEE LLSLEERIGD VCTGLNEETI SNRLKQQKYK SSTRSSQEVE PCCVCQEEYK
601: EEEEIGRLEC GHDFHSQCIK EWLKQKNLCP ICKTTGLNTA NKPQR
Arabidopsis Description
F27F5.26 [Source:UniProtKB/TrEMBL;Acc:Q9MAJ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.