Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97032 | Canola | plastid | 61.57 | 93.73 |
| CDY71882 | Canola | plastid | 64.31 | 93.71 |
| CDX95473 | Canola | nucleus | 83.92 | 92.24 |
| Bra009015.1-P | Field mustard | plastid | 92.94 | 88.93 |
| CDX69813 | Canola | mitochondrion | 92.16 | 88.18 |
| CDX85750 | Canola | nucleus | 58.24 | 76.94 |
| CDX78393 | Canola | nucleus | 74.51 | 76.92 |
| CDX70363 | Canola | nucleus | 72.75 | 76.34 |
| AT5G10650.2 | Thale cress | nucleus | 74.31 | 72.19 |
| CDY40109 | Canola | nucleus | 24.9 | 68.28 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 9.8 | 54.35 |
| CDX88140 | Canola | nucleus | 50.2 | 53.11 |
| CDY68658 | Canola | nucleus | 48.82 | 53.09 |
| Zm00001d013776_P001 | Maize | cytosol | 12.94 | 51.16 |
| Zm00001d015453_P001 | Maize | cytosol | 12.94 | 51.16 |
| Zm00001d019616_P001 | Maize | cytosol | 12.94 | 51.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.8 | 44.89 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 46.08 | 42.73 |
| KRH04957 | Soybean | nucleus | 43.14 | 41.35 |
| KRH52597 | Soybean | nucleus | 42.94 | 40.48 |
| PGSC0003DMT400067670 | Potato | nucleus | 40.0 | 38.64 |
| KRH16134 | Soybean | nucleus | 41.96 | 38.56 |
| Solyc08g006460.2.1 | Tomato | nucleus | 39.02 | 37.48 |
| Solyc12g096420.1.1 | Tomato | nucleus | 40.39 | 37.39 |
| PGSC0003DMT400075959 | Potato | nucleus | 39.41 | 36.88 |
| KRH61936 | Soybean | nucleus | 38.82 | 35.55 |
| CDY13429 | Canola | cytosol | 17.65 | 34.88 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 30.98 | 30.74 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 31.96 | 28.9 |
| Os06t0695600-01 | Rice | nucleus | 32.75 | 28.84 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 32.75 | 28.64 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 32.16 | 28.37 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 32.55 | 28.33 |
| KXG20741 | Sorghum | nucleus | 32.75 | 28.31 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 31.57 | 28.1 |
| Zm00001d014609_P002 | Maize | nucleus | 31.96 | 27.86 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 32.35 | 27.36 |
| EES12797 | Sorghum | nucleus | 19.8 | 27.01 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 19.8 | 26.93 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 19.61 | 26.81 |
| Os08t0241400-00 | Rice | nucleus | 19.8 | 26.79 |
| Zm00001d015289_P001 | Maize | nucleus | 29.61 | 26.68 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 19.22 | 26.56 |
| Zm00001d024406_P002 | Maize | nucleus | 18.43 | 26.26 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 19.02 | 26.08 |
| OQU80147 | Sorghum | nucleus | 18.24 | 25.98 |
| EES04530 | Sorghum | nucleus | 26.27 | 25.87 |
| Zm00001d026248_P001 | Maize | nucleus | 18.43 | 24.74 |
| Os02t0150700-01 | Rice | extracellular | 30.98 | 24.65 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 28.04 | 24.61 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 18.82 | 24.18 |
| CDX73013 | Canola | plastid | 16.47 | 23.66 |
| Os04t0603200-01 | Rice | nucleus | 15.1 | 23.4 |
| CDY63645 | Canola | nucleus | 21.18 | 23.38 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 31.76 | 23.31 |
| CDY60141 | Canola | plastid | 16.27 | 23.25 |
| CDY67192 | Canola | nucleus | 9.61 | 23.0 |
| CDY13433 | Canola | nucleus | 20.78 | 22.75 |
| CDX77848 | Canola | nucleus | 9.41 | 22.64 |
| CDY11092 | Canola | cytosol, plastid | 15.29 | 22.41 |
| CDX68213 | Canola | nucleus, plastid | 15.29 | 22.35 |
| CDX96741 | Canola | nucleus | 15.69 | 21.98 |
| CDX83878 | Canola | nucleus | 15.29 | 21.85 |
| CDX93901 | Canola | nucleus | 9.8 | 20.83 |
| CDY53710 | Canola | nucleus | 9.8 | 20.66 |
| CDY27083 | Canola | nucleus | 8.04 | 18.72 |
| CDX91624 | Canola | nucleus | 8.04 | 18.64 |
| CDY31919 | Canola | nucleus | 9.41 | 17.58 |
| CDY00512 | Canola | nucleus | 9.41 | 17.58 |
| CDY26006 | Canola | nucleus | 15.88 | 17.53 |
| CDY43590 | Canola | nucleus | 14.31 | 17.34 |
| CDY32973 | Canola | nucleus | 13.92 | 17.32 |
| CDY24110 | Canola | nucleus | 15.29 | 16.96 |
| CDY24595 | Canola | nucleus | 10.39 | 16.83 |
| CDY68521 | Canola | nucleus | 14.51 | 16.78 |
| CDX75805 | Canola | cytosol | 14.51 | 16.7 |
| CDX79718 | Canola | nucleus | 17.25 | 16.57 |
| CDX97629 | Canola | nucleus | 14.31 | 16.55 |
| CDY46757 | Canola | nucleus | 17.06 | 16.32 |
| CDY25357 | Canola | nucleus | 10.2 | 16.25 |
| CDY25871 | Canola | nucleus | 14.9 | 15.9 |
| CDY42218 | Canola | nucleus | 10.39 | 15.87 |
| CDX82450 | Canola | nucleus | 13.92 | 15.85 |
| CDY33429 | Canola | nucleus | 10.2 | 15.76 |
| CDY62314 | Canola | nucleus | 18.24 | 15.71 |
| CDY37230 | Canola | nucleus | 18.04 | 15.62 |
| CDY17114 | Canola | nucleus | 16.08 | 15.44 |
| CDY55435 | Canola | nucleus | 15.88 | 15.34 |
| CDY55839 | Canola | nucleus | 14.71 | 15.34 |
| CDY68424 | Canola | nucleus | 15.88 | 15.08 |
| CDY22376 | Canola | nucleus | 17.84 | 14.8 |
| CDX91625 | Canola | cytosol | 6.27 | 13.97 |
| CDY17061 | Canola | nucleus | 16.47 | 13.86 |
| CDY43220 | Canola | nucleus | 16.27 | 13.63 |
| CDX71531 | Canola | nucleus | 16.86 | 13.5 |
| CDY27082 | Canola | cytosol | 6.08 | 13.03 |
| CDY47948 | Canola | nucleus | 7.84 | 7.95 |
| CDY69560 | Canola | nucleus | 6.27 | 6.29 |
| CDY36635 | Canola | nucleus | 6.27 | 5.37 |
Protein Annotations
| EnsemblPlants:CDX97044 | EnsemblPlantsGene:GSBRNA2T00104011001 | Gene3D:3.30.40.10 | GO:A0A078E8K9 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX97044 | ProteinID:CDX97044.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EED466 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC09g45810D
Coordinates
chrLK031897:-:337718..341153
Molecular Weight (calculated)
54798.1 Da
IEP (calculated)
9.758
GRAVY (calculated)
-0.635
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGCAGKRSV DRMVLPRKAS GPVLRENMKK NDEKSVSFCS RIACSAKVTS TMGTNRIGST ADNTKVGRPG KAIVASSSRA PGGFGNLRKP ATGTTGRRQP
101: SSNVDTGSSE KSSSLDHPAA VKPILPRLKT RRSAISVQSQ NTVSREVVGS SSRGTIRSSH QKPGLRTRDT LVSVSPSVSS SSGSDHTLRG GLSRNGLRNL
201: RCNSVSDVLP TKSSSGTKVS VTKKKNSDGE SSSSSQGSKS SVSVMKGRNQ SSTHGNGITV SDNRRKRTVP TIRDNSVVSS SGRRSWRLGA AVASPATSRQ
301: TPQPATPINP NHSLSVTPSN SHSSTDWLSS MIPGSPSEAH PSSSLVDRDG LSRYNMNGIA EALLALERID QDQELTYEQL ASLETNLFAS GMIRFYDQHS
401: DMRLDIDNMS YEELLALGDE IGTVSTALSE EALSRSLKKS IYQETDETGP ISLDKADDIK CSICQEEYVD GDEVGTMPCE HMYHVSCVQQ WLRMKNWCPI
501: CKTSAEEKMS
101: SSNVDTGSSE KSSSLDHPAA VKPILPRLKT RRSAISVQSQ NTVSREVVGS SSRGTIRSSH QKPGLRTRDT LVSVSPSVSS SSGSDHTLRG GLSRNGLRNL
201: RCNSVSDVLP TKSSSGTKVS VTKKKNSDGE SSSSSQGSKS SVSVMKGRNQ SSTHGNGITV SDNRRKRTVP TIRDNSVVSS SGRRSWRLGA AVASPATSRQ
301: TPQPATPINP NHSLSVTPSN SHSSTDWLSS MIPGSPSEAH PSSSLVDRDG LSRYNMNGIA EALLALERID QDQELTYEQL ASLETNLFAS GMIRFYDQHS
401: DMRLDIDNMS YEELLALGDE IGTVSTALSE EALSRSLKKS IYQETDETGP ISLDKADDIK CSICQEEYVD GDEVGTMPCE HMYHVSCVQQ WLRMKNWCPI
501: CKTSAEEKMS
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.