Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24595 | Canola | nucleus | 95.62 | 97.14 |
| Bra022466.1-P | Field mustard | nucleus | 97.81 | 96.6 |
| CDY33429 | Canola | nucleus | 87.5 | 84.85 |
| CDY42218 | Canola | nucleus | 87.5 | 83.83 |
| AT3G19910.1 | Thale cress | nucleus | 84.69 | 79.71 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 51.25 | 53.25 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 19.06 | 51.69 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 47.81 | 51.69 |
| OQU80744 | Sorghum | mitochondrion | 22.19 | 49.31 |
| KRG90628 | Soybean | nucleus | 51.25 | 48.96 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 44.38 | 48.63 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 42.81 | 47.57 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 18.12 | 47.54 |
| EES15239 | Sorghum | nucleus | 45.0 | 45.86 |
| Os08t0548300-01 | Rice | nucleus | 42.5 | 44.59 |
| EER97094 | Sorghum | nucleus | 44.69 | 44.14 |
| Os09t0535100-01 | Rice | nucleus | 44.69 | 44.0 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 39.38 | 43.9 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 46.56 | 43.82 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 40.62 | 43.48 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 48.12 | 43.38 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 40.31 | 43.0 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 45.94 | 42.49 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 39.69 | 42.47 |
| Zm00001d006226_P001 | Maize | peroxisome | 40.62 | 40.88 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 40.94 | 40.68 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 38.44 | 40.07 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 47.19 | 39.95 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 37.5 | 39.87 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 45.0 | 38.92 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 25.94 | 37.39 |
| CDX93901 | Canola | nucleus | 21.25 | 28.33 |
| CDY53710 | Canola | nucleus | 21.25 | 28.1 |
| CDX77848 | Canola | nucleus | 16.88 | 25.47 |
| CDX91624 | Canola | nucleus | 17.19 | 25.0 |
| CDY67192 | Canola | nucleus | 16.56 | 24.88 |
| CDY27083 | Canola | nucleus | 16.56 | 24.2 |
| CDY00512 | Canola | nucleus | 19.69 | 23.08 |
| CDY31919 | Canola | nucleus | 19.69 | 23.08 |
| CDX91625 | Canola | cytosol | 14.06 | 19.65 |
| CDY27082 | Canola | cytosol | 12.81 | 17.23 |
| CDY13429 | Canola | cytosol | 13.12 | 16.28 |
| CDX97032 | Canola | plastid | 14.38 | 13.73 |
| CDY71882 | Canola | plastid | 14.38 | 13.14 |
| CDX85750 | Canola | nucleus | 14.69 | 12.18 |
| CDY60141 | Canola | plastid | 13.12 | 11.76 |
| CDX73013 | Canola | plastid | 12.81 | 11.55 |
| CDY32973 | Canola | nucleus | 14.69 | 11.46 |
| CDX68213 | Canola | nucleus, plastid | 12.5 | 11.46 |
| CDY43590 | Canola | nucleus | 14.38 | 10.93 |
| CDY17114 | Canola | nucleus | 18.12 | 10.92 |
| CDY11092 | Canola | cytosol, plastid | 11.88 | 10.92 |
| CDY40109 | Canola | nucleus | 6.25 | 10.75 |
| CDX75805 | Canola | cytosol | 14.69 | 10.61 |
| CDX88140 | Canola | nucleus | 15.94 | 10.58 |
| CDX82450 | Canola | nucleus | 14.69 | 10.49 |
| CDY68658 | Canola | nucleus | 15.31 | 10.45 |
| CDX96741 | Canola | nucleus | 11.88 | 10.44 |
| CDY68521 | Canola | nucleus | 14.38 | 10.43 |
| CDY63645 | Canola | nucleus | 15.0 | 10.39 |
| CDX83878 | Canola | nucleus | 11.56 | 10.36 |
| CDX95473 | Canola | nucleus | 15.0 | 10.34 |
| CDY46757 | Canola | nucleus | 17.19 | 10.32 |
| CDY13433 | Canola | nucleus | 15.0 | 10.3 |
| CDX97629 | Canola | nucleus | 14.06 | 10.2 |
| CDX97044 | Canola | nucleus | 16.25 | 10.2 |
| CDX79718 | Canola | nucleus | 16.56 | 9.98 |
| CDX78393 | Canola | nucleus | 15.31 | 9.92 |
| CDY24110 | Canola | nucleus | 14.06 | 9.78 |
| CDY26006 | Canola | nucleus | 14.06 | 9.74 |
| CDX70363 | Canola | nucleus | 14.38 | 9.47 |
| CDY25871 | Canola | nucleus | 14.06 | 9.41 |
| CDY55839 | Canola | nucleus | 14.38 | 9.41 |
| CDY55435 | Canola | nucleus | 15.31 | 9.28 |
| CDX69813 | Canola | mitochondrion | 15.31 | 9.19 |
| CDY68424 | Canola | nucleus | 15.31 | 9.12 |
| CDY62314 | Canola | nucleus | 16.56 | 8.95 |
| CDY37230 | Canola | nucleus | 16.25 | 8.83 |
| CDY22376 | Canola | nucleus | 16.56 | 8.62 |
| CDX71531 | Canola | nucleus | 16.88 | 8.48 |
| CDY17061 | Canola | nucleus | 14.38 | 7.59 |
| CDY43220 | Canola | nucleus | 14.38 | 7.55 |
| CDY47948 | Canola | nucleus | 8.44 | 5.37 |
| CDY69560 | Canola | nucleus | 5.94 | 3.73 |
| CDY36635 | Canola | nucleus | 5.31 | 2.85 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078GJJ2 |
| UniProt:A0A078GJJ2 | EnsemblPlants:CDY25357 | ProteinID:CDY25357 | ProteinID:CDY25357.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00029476001 | InterPro:IPR001841 | InterPro:IPR011016 | InterPro:IPR013083 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 | SMART:SM00184 | SMART:SM00744 |
| SUPFAM:SSF57850 | UniParc:UPI0004EDEEB4 | InterPro:Znf_RING | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA05g19270DBnaA05g19270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJJ2]
Coordinates
chrLK032174:+:222659..225342
Molecular Weight (calculated)
35034.0 Da
IEP (calculated)
3.652
GRAVY (calculated)
-0.767
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMENDNDHA ANVVLTAEQA SKVSDTAVRL PENLPTGVVS ESGGGSEKGE EAVETAVAED VDESGSNTVG ELPPRSSSAR VPFTNLSQID ADLALARTLQ
101: EQERAYMMLT MNSEVSDYGS WETGSYVYEE DEDDDEDEYE TDDDPQGDAP DVNAHEDEVR IADEEEVGYS DDEAFARAIQ EAEEREMADR LSALTGLANR
201: VEDLEDDDHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKDGDN QNGTNESCVI CRLDYEDDDD LILLPCKHSY HSECINNWLK
301: INKSCPVCSA EVSTSTAGQS
101: EQERAYMMLT MNSEVSDYGS WETGSYVYEE DEDDDEDEYE TDDDPQGDAP DVNAHEDEVR IADEEEVGYS DDEAFARAIQ EAEEREMADR LSALTGLANR
201: VEDLEDDDHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKDGDN QNGTNESCVI CRLDYEDDDD LILLPCKHSY HSECINNWLK
301: INKSCPVCSA EVSTSTAGQS
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.