Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97094 | Sorghum | nucleus | 90.88 | 89.2 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 86.79 | 85.71 |
| Os09t0535100-01 | Rice | nucleus | 71.38 | 69.85 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 72.01 | 67.35 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 24.84 | 66.95 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 72.33 | 66.47 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 72.33 | 62.16 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 23.58 | 61.48 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 72.64 | 61.11 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 51.89 | 55.74 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 49.37 | 53.77 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 48.11 | 53.31 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 45.28 | 46.75 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 44.65 | 46.25 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 43.71 | 46.18 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 31.13 | 44.59 |
| KRG90628 | Soybean | nucleus | 46.54 | 44.18 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 46.54 | 41.69 |
| CDY24595 | Canola | nucleus | 40.25 | 40.63 |
| CDY25357 | Canola | nucleus | 40.88 | 40.62 |
| Bra022466.1-P | Field mustard | nucleus | 41.2 | 40.43 |
| AT3G19910.1 | Thale cress | nucleus | 42.77 | 40.0 |
| Bra038240.1-P | Field mustard | nucleus | 41.51 | 39.64 |
| CDY42218 | Canola | nucleus | 41.51 | 39.52 |
| CDY33429 | Canola | nucleus | 40.57 | 39.09 |
| Zm00001d021225_P002 | Maize | cytosol | 17.3 | 31.43 |
| Zm00001d048301_P001 | Maize | cytosol | 22.33 | 29.46 |
| Zm00001d027868_P004 | Maize | cytosol | 24.53 | 28.89 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 18.24 | 21.64 |
| Zm00001d002624_P003 | Maize | cytosol | 21.7 | 20.54 |
| Zm00001d026446_P001 | Maize | cytosol | 10.69 | 18.48 |
| Zm00001d015453_P001 | Maize | cytosol | 7.23 | 17.83 |
| Zm00001d013776_P001 | Maize | cytosol | 6.92 | 17.05 |
| Zm00001d019616_P001 | Maize | cytosol | 6.92 | 17.05 |
| Zm00001d024406_P002 | Maize | nucleus | 15.09 | 13.41 |
| Zm00001d011636_P001 | Maize | nucleus | 13.84 | 13.02 |
| Zm00001d026248_P001 | Maize | nucleus | 15.41 | 12.89 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 15.09 | 12.5 |
| Zm00001d043784_P002 | Maize | nucleus | 13.52 | 12.43 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 14.47 | 11.59 |
| Zm00001d009571_P002 | Maize | nucleus | 16.67 | 10.35 |
| Zm00001d039015_P002 | Maize | cytosol | 11.64 | 9.05 |
| Zm00001d015289_P001 | Maize | nucleus | 16.04 | 9.01 |
| Zm00001d008649_P003 | Maize | cytosol | 14.78 | 8.92 |
| Zm00001d015323_P002 | Maize | cytosol | 3.14 | 8.85 |
| Zm00001d011541_P004 | Maize | nucleus | 14.47 | 8.68 |
| Zm00001d039769_P002 | Maize | cytosol | 14.47 | 8.35 |
| Zm00001d026445_P001 | Maize | nucleus | 16.04 | 7.79 |
| Zm00001d025027_P002 | Maize | nucleus | 16.67 | 7.61 |
| Zm00001d002080_P002 | Maize | nucleus | 15.72 | 7.54 |
| Zm00001d014609_P002 | Maize | nucleus | 13.21 | 7.18 |
| Zm00001d004300_P003 | Maize | nucleus | 15.41 | 7.06 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 8.49 | 4.39 |
Protein Annotations
| EnsemblPlants:Zm00001d006226_P001 | EnsemblPlants:Zm00001d006226_T001 | EnsemblPlantsGene:Zm00001d006226 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF172 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:ONM23134.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI000845075D | UniProt:A0A1D6ETY6 | MapMan:35.1 |
Description
Protein binding protein
Coordinates
chr2:+:202327057..202329536
Molecular Weight (calculated)
34283.3 Da
IEP (calculated)
3.788
GRAVY (calculated)
-0.727
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSKGSGGG GAGAGSEKPS AESNPSLNLP PPTAADVEAT DDGGATAAAA AAAEAARRPF TALSQEEADL ALARVLQEQE RAYMLLRMNG SGGEGSDYGS
101: SDAGSYEYDE EGDDYEEELE HHLRVHHHEH PSGDGDGEGE GEGAEGSDYD EEYEEDEEGE PEVDPAEFEN DEAYARALQD AEELEVAARL MALAGLSDWR
201: TVDVEHEEDH VNDPQEAWQE VDPDEYSYEA SYIACCELVA LGEVVGTENR GLSADALASL PSVTYKMQSV QDGNTEHTVD RCVICRVELE EGESLIALPC
301: KHLYHPECIN QWLQINKV
101: SDAGSYEYDE EGDDYEEELE HHLRVHHHEH PSGDGDGEGE GEGAEGSDYD EEYEEDEEGE PEVDPAEFEN DEAYARALQD AEELEVAARL MALAGLSDWR
201: TVDVEHEEDH VNDPQEAWQE VDPDEYSYEA SYIACCELVA LGEVVGTENR GLSADALASL PSVTYKMQSV QDGNTEHTVD RCVICRVELE EGESLIALPC
301: KHLYHPECIN QWLQINKV
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.