Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019616_P001 | Maize | cytosol | 65.49 | 57.36 |
| Zm00001d013776_P001 | Maize | cytosol | 65.49 | 57.36 |
| Zm00001d015453_P001 | Maize | cytosol | 63.72 | 55.81 |
| Zm00001d015289_P001 | Maize | nucleus | 62.83 | 12.54 |
| Zm00001d026446_P001 | Maize | cytosol | 15.04 | 9.24 |
| Zm00001d014609_P002 | Maize | nucleus | 42.48 | 8.21 |
| Zm00001d021225_P002 | Maize | cytosol | 11.5 | 7.43 |
| Zm00001d024406_P002 | Maize | nucleus | 17.7 | 5.59 |
| Zm00001d026248_P001 | Maize | nucleus | 15.93 | 4.74 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 15.93 | 4.53 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 11.5 | 4.53 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 10.62 | 4.48 |
| Zm00001d011636_P001 | Maize | nucleus | 13.27 | 4.44 |
| Zm00001d043784_P002 | Maize | nucleus | 13.27 | 4.34 |
| Zm00001d048301_P001 | Maize | cytosol | 8.85 | 4.15 |
| Zm00001d039769_P002 | Maize | cytosol | 19.47 | 3.99 |
| Zm00001d008649_P003 | Maize | cytosol | 18.58 | 3.98 |
| Zm00001d002080_P002 | Maize | nucleus | 22.12 | 3.77 |
| Zm00001d027868_P004 | Maize | cytosol | 8.85 | 3.7 |
| Zm00001d026445_P001 | Maize | nucleus | 20.35 | 3.51 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 11.5 | 3.39 |
| Zm00001d004300_P003 | Maize | nucleus | 20.35 | 3.31 |
| Zm00001d006226_P001 | Maize | peroxisome | 8.85 | 3.14 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 8.85 | 3.11 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 16.81 | 3.09 |
| Zm00001d025027_P002 | Maize | nucleus | 18.58 | 3.02 |
| Zm00001d009571_P002 | Maize | nucleus | 13.27 | 2.93 |
| Zm00001d011541_P004 | Maize | nucleus | 13.27 | 2.83 |
| Zm00001d002624_P003 | Maize | cytosol | 7.96 | 2.68 |
| GSMUA_Achr4P06080_001 | Banana | nucleus | 8.85 | 2.16 |
| CDY69560 | Canola | nucleus | 5.31 | 1.18 |
| CDY36635 | Canola | nucleus | 5.31 | 1.01 |
| Zm00001d039015_P002 | Maize | cytosol | 3.54 | 0.98 |
| KRH05663 | Soybean | cytosol | 2.65 | 0.52 |
Protein Annotations
| EnsemblPlants:Zm00001d015323_P002 | EnsemblPlants:Zm00001d015323_T002 | EnsemblPlantsGene:Zm00001d015323 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016874 |
| ncoils:Coil | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF60 | ProteinID:AQK68659.1 | SEG:seg | UniParc:UPI000842576D |
| UniProt:A0A1D6H1A3 | MapMan:35.2 | : | : | : | : |
Description
E3 ubiquitin-protein ligase MBR2
Coordinates
chr5:-:84504239..84505734
Molecular Weight (calculated)
13215.6 Da
IEP (calculated)
4.242
GRAVY (calculated)
-0.342
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHNLIGERD SHRHITMEGI TEVLVALERI EQQVELTYDQ LLMLEANLVF GAFASYDRHR DMRMDIDDMS YEVHALSVCD DPEYFYDYVQ GLIDGLNSGL
101: DSRDIVRSQQ INR
101: DSRDIVRSQQ INR
001: MDGFKGKRTS RPIMPRKASG LVLHENMKKK DDKSVVPICS RIGCSSRVSS TKGDLIDHKA KATVSSFRSP LSGKETVGSS SRSMSGFGGT KKASKVIGRR
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
Arabidopsis Description
At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.