Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03404 | Sorghum | nucleus | 90.0 | 91.55 |
| Os01t0667700-02 | Rice | nucleus | 70.57 | 71.37 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 70.94 | 71.21 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 70.94 | 71.21 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 70.19 | 70.59 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 69.81 | 70.34 |
| Zm00001d039015_P002 | Maize | cytosol | 36.6 | 47.43 |
| Zm00001d009571_P002 | Maize | nucleus | 45.28 | 46.88 |
| Zm00001d026446_P001 | Maize | cytosol | 12.45 | 35.87 |
| Zm00001d015453_P001 | Maize | cytosol | 7.17 | 29.46 |
| Zm00001d019616_P001 | Maize | cytosol | 6.98 | 28.68 |
| Zm00001d013776_P001 | Maize | cytosol | 6.98 | 28.68 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 23.4 | 23.05 |
| Solyc12g014070.1.1 | Tomato | nucleus | 23.21 | 22.99 |
| PGSC0003DMT400039631 | Potato | nucleus | 23.21 | 22.95 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 16.79 | 22.65 |
| Zm00001d021225_P002 | Maize | cytosol | 7.17 | 21.71 |
| Zm00001d043784_P002 | Maize | nucleus | 14.15 | 21.68 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 17.17 | 21.62 |
| KRH26195 | Soybean | nucleus | 18.49 | 21.4 |
| Zm00001d011636_P001 | Maize | nucleus | 13.58 | 21.3 |
| CDY26006 | Canola | nucleus | 18.49 | 21.21 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 10.57 | 20.9 |
| CDY24110 | Canola | nucleus | 18.11 | 20.87 |
| Bra039659.1-P | Field mustard | nucleus | 18.11 | 20.87 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 17.92 | 20.79 |
| KRH55161 | Soybean | nucleus | 17.92 | 20.74 |
| AT1G53190.1 | Thale cress | nucleus | 19.06 | 20.45 |
| PGSC0003DMT400054921 | Potato | nucleus | 20.0 | 20.42 |
| Zm00001d048301_P001 | Maize | cytosol | 9.25 | 20.33 |
| KRH22017 | Soybean | nucleus | 20.0 | 20.08 |
| KRH30071 | Soybean | cytosol | 13.02 | 20.06 |
| Solyc10g007140.2.1 | Tomato | nucleus | 19.62 | 20.04 |
| CDX82450 | Canola | nucleus | 16.79 | 19.87 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 14.34 | 19.79 |
| Zm00001d026248_P001 | Maize | nucleus | 14.15 | 19.74 |
| CDX75805 | Canola | cytosol | 16.42 | 19.64 |
| KRH55165 | Soybean | nucleus | 11.51 | 19.61 |
| Zm00001d024406_P002 | Maize | nucleus | 13.21 | 19.55 |
| AT3G15070.1 | Thale cress | nucleus | 17.92 | 19.55 |
| Bra001582.1-P | Field mustard | nucleus | 16.04 | 19.45 |
| CDY68521 | Canola | nucleus | 16.04 | 19.27 |
| CDY25871 | Canola | nucleus | 17.36 | 19.25 |
| Bra038109.1-P | Field mustard | nucleus | 17.36 | 19.17 |
| CDY55839 | Canola | nucleus | 17.55 | 19.02 |
| CDX97629 | Canola | nucleus | 15.66 | 18.82 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 13.96 | 18.64 |
| Zm00001d027868_P004 | Maize | cytosol | 9.43 | 18.52 |
| Bra027282.1-P | Field mustard | nucleus | 15.47 | 18.43 |
| KRH55090 | Soybean | nucleus | 12.08 | 17.2 |
| Zm00001d008649_P003 | Maize | cytosol | 16.79 | 16.89 |
| Zm00001d039769_P002 | Maize | cytosol | 17.36 | 16.7 |
| Zm00001d002624_P003 | Maize | cytosol | 10.0 | 15.77 |
| Zm00001d026445_P001 | Maize | nucleus | 19.25 | 15.57 |
| Zm00001d004300_P003 | Maize | nucleus | 20.38 | 15.56 |
| Zm00001d025027_P002 | Maize | nucleus | 20.38 | 15.52 |
| Zm00001d002080_P002 | Maize | nucleus | 19.25 | 15.38 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 8.3 | 15.33 |
| Zm00001d015289_P001 | Maize | nucleus | 16.04 | 15.02 |
| Zm00001d014609_P002 | Maize | nucleus | 16.04 | 14.53 |
| Zm00001d006226_P001 | Maize | peroxisome | 8.68 | 14.47 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 8.68 | 14.29 |
| Zm00001d015323_P002 | Maize | cytosol | 2.83 | 13.27 |
| Solyc07g062720.1.1 | Tomato | nucleus | 19.25 | 13.16 |
| PGSC0003DMT400032385 | Potato | nucleus | 19.81 | 12.93 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 10.57 | 9.11 |
Protein Annotations
| EnsemblPlants:Zm00001d011541_P004 | EnsemblPlants:Zm00001d011541_T004 | EnsemblPlantsGene:Zm00001d011541 | EntrezGene:100192681 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF67 |
| PFAM:PF13639 | PFscan:PS50089 | ProteinID:AQK97149.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0008456F8A | UniProt:A0A1D6G122 | MapMan:35.1 | : | : | : |
Description
RING/U-box superfamily protein
Coordinates
chr8:-:153955867..153961466
Molecular Weight (calculated)
58300.9 Da
IEP (calculated)
6.671
GRAVY (calculated)
-0.520
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRNMVCTP QVINLTSDSE RGQAQGGNGS EISEQGAQHA VRVVGNAMNI GLSGVRSYYD MSINHHHQSV HNPPPNLGVD SGFVFASNMY NPCMSSTSMN
101: RHVSHAQSFG SGNQVLPQNQ VPGTMDESSR NDSIGESARE HIKRKNAAVA GSYHFVNGFA SSSSSSHAPQ NPMLGPWDPS FESTVSSNVA PFNPSEYHGH
201: NNSWPSLEGS SITGSNGFNS MVVHPDSVQR GNYTFPPTHI SHSWMSHATN GIADGVPQWE YANATANIQG RFAHSGATEI ANVGFHEYQN GPSTICRGPV
301: PYFHQHAMHG MQALDPTQMQ VPYQQCHSNG FLHGGINYPG NRLQLGPRNP VLFTSSERAF GPPQHPFLAN PVNHRNIRIL PPELIWLTFL SQQHATIMDF
401: SRLYEVSNTV DEHRDMRLDI DSMTYEELLA LEEQIGDVNT GLTKSHIVDK LRTSLYVPGI SSMSDQPSKS SLENDACIIC QEEYQARDCV GTLDCGHRYH
501: AECVKQWLMV KNLCPICKTT ALSANRRQGQ
101: RHVSHAQSFG SGNQVLPQNQ VPGTMDESSR NDSIGESARE HIKRKNAAVA GSYHFVNGFA SSSSSSHAPQ NPMLGPWDPS FESTVSSNVA PFNPSEYHGH
201: NNSWPSLEGS SITGSNGFNS MVVHPDSVQR GNYTFPPTHI SHSWMSHATN GIADGVPQWE YANATANIQG RFAHSGATEI ANVGFHEYQN GPSTICRGPV
301: PYFHQHAMHG MQALDPTQMQ VPYQQCHSNG FLHGGINYPG NRLQLGPRNP VLFTSSERAF GPPQHPFLAN PVNHRNIRIL PPELIWLTFL SQQHATIMDF
401: SRLYEVSNTV DEHRDMRLDI DSMTYEELLA LEEQIGDVNT GLTKSHIVDK LRTSLYVPGI SSMSDQPSKS SLENDACIIC QEEYQARDCV GTLDCGHRYH
501: AECVKQWLMV KNLCPICKTT ALSANRRQGQ
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.