Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 84.09 | 90.08 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 94.77 | 87.31 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 85.27 | 66.73 |
| VIT_16s0022g00290.t01 | Wine grape | nucleus | 7.6 | 42.11 |
| KRH55161 | Soybean | nucleus | 39.19 | 36.03 |
| VIT_07s0031g00380.t01 | Wine grape | cytosol | 5.94 | 35.71 |
| KRH26195 | Soybean | nucleus | 38.72 | 35.59 |
| KRH30071 | Soybean | cytosol | 28.98 | 35.47 |
| Solyc12g014070.1.1 | Tomato | nucleus | 42.76 | 33.64 |
| PGSC0003DMT400039631 | Potato | nucleus | 42.28 | 33.21 |
| KRH22017 | Soybean | nucleus | 40.62 | 32.39 |
| VIT_07s0031g00400.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 7.84 | 32.35 |
| KRH55165 | Soybean | nucleus | 23.28 | 31.51 |
| KRH55090 | Soybean | nucleus | 27.08 | 30.65 |
| Solyc10g007140.2.1 | Tomato | nucleus | 35.63 | 28.9 |
| PGSC0003DMT400054921 | Potato | nucleus | 35.15 | 28.52 |
| VIT_07s0031g00370.t01 | Wine grape | mitochondrion | 9.26 | 26.9 |
| CDX97629 | Canola | nucleus | 27.55 | 26.3 |
| CDX75805 | Canola | cytosol | 27.55 | 26.19 |
| Bra001582.1-P | Field mustard | nucleus | 27.08 | 26.09 |
| CDY68521 | Canola | nucleus | 27.08 | 25.85 |
| Bra027282.1-P | Field mustard | nucleus | 27.32 | 25.84 |
| CDX82450 | Canola | nucleus | 27.32 | 25.67 |
| CDY26006 | Canola | nucleus | 27.79 | 25.32 |
| CDY24110 | Canola | nucleus | 27.55 | 25.22 |
| Bra039659.1-P | Field mustard | nucleus | 27.55 | 25.22 |
| CDY25871 | Canola | nucleus | 28.5 | 25.1 |
| AT3G15070.1 | Thale cress | nucleus | 28.98 | 25.1 |
| Bra038109.1-P | Field mustard | nucleus | 28.5 | 25.0 |
| AT1G53190.1 | Thale cress | nucleus | 29.22 | 24.9 |
| VIT_11s0118g00640.t01 | Wine grape | nucleus | 6.89 | 24.37 |
| CDY55839 | Canola | nucleus | 28.27 | 24.34 |
| VIT_07s0031g00440.t01 | Wine grape | nucleus | 10.45 | 20.0 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 24.23 | 18.68 |
| EES03404 | Sorghum | nucleus | 22.57 | 18.23 |
| Solyc07g062720.1.1 | Tomato | nucleus | 33.25 | 18.06 |
| Os01t0667700-02 | Rice | nucleus | 22.09 | 17.75 |
| PGSC0003DMT400032385 | Potato | nucleus | 33.73 | 17.49 |
| VIT_18s0001g02280.t01 | Wine grape | nucleus | 8.55 | 17.39 |
| VIT_07s0031g00390.t01 | Wine grape | nucleus | 9.98 | 17.21 |
| Os05t0564300-01 | Rice | nucleus | 20.43 | 17.2 |
| Zm00001d011541_P004 | Maize | nucleus | 21.62 | 17.17 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.43 | 16.32 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.43 | 16.29 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.43 | 16.29 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 20.19 | 16.16 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 13.06 | 15.67 |
| KXG22536 | Sorghum | nucleus | 18.76 | 15.55 |
| Zm00001d009571_P002 | Maize | nucleus | 18.76 | 15.43 |
| VIT_13s0019g04100.t01 | Wine grape | extracellular | 20.67 | 15.4 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 7.84 | 15.07 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 13.06 | 14.82 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 18.05 | 14.62 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 18.29 | 14.29 |
| VIT_13s0064g01030.t01 | Wine grape | nucleus | 8.31 | 14.17 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 17.58 | 14.12 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 18.05 | 13.87 |
| VIT_06s0004g01930.t01 | Wine grape | nucleus | 8.08 | 13.49 |
| VIT_18s0001g10260.t01 | Wine grape | nucleus | 22.8 | 13.08 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 9.5 | 12.99 |
| Zm00001d039015_P002 | Maize | cytosol | 11.4 | 11.74 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 20.43 | 11.72 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 14.01 | 10.73 |
Protein Annotations
| EntrezGene:100257670 | wikigene:100257670 | Gene3D:3.30.40.10 | MapMan:35.1 | ProteinID:CCB58927 | ProteinID:CCB58927.1 |
| UniProt:F6HW63 | EMBL:FN596261 | InterPro:IPR001841 | InterPro:IPR013083 | EntrezGene:LOC100257670 | wikigene:LOC100257670 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0001982DAD | ArrayExpress:VIT_03s0097g00680 | EnsemblPlantsGene:VIT_03s0097g00680 | EnsemblPlants:VIT_03s0097g00680.t01 | RefSeq:XP_002264258 | RefSeq:XP_002264258.1 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:-:11239802..11241097
Molecular Weight (calculated)
45903.5 Da
IEP (calculated)
6.906
GRAVY (calculated)
-0.576
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSAPENSSH FDAPHLPQHY DGSAMFYGIR LHHPLPSLDI AVAPRSNIHD RKNAQGILGN FHYFNGFASS SSSAPPFNTR HLEFGVPVMD SASLAFAQPQ
101: YRGNNAPSIM EVGSHRSVRN RSGAVGPDSV LAHNHYHLVQ GNHIGHPFQP SGNPWVDQQS GNNGSGGGTL AWNHGLALPY LHGSNISGGS REAGNVGIQG
201: YHDTSSGRSS TDYLQPPVLH RHHNLHYPPP PPPPPMQGAR RHFHPQVVAS SYRLATISSR SPEPPQVGAE AGHRHPGPVP PTWIRIDRSH QGGVAPEATS
301: RHGNLPYLRT LPEEEVAILD LSASYQVGEV GTGLSEESIT NCLKTRTYIS STCLNLEEGA SMDQEKDSCI ICQEEYENEE KIGFLDCGHE YHADCLKKWV
401: LVKNVCPLCR APAMTPKKED V
101: YRGNNAPSIM EVGSHRSVRN RSGAVGPDSV LAHNHYHLVQ GNHIGHPFQP SGNPWVDQQS GNNGSGGGTL AWNHGLALPY LHGSNISGGS REAGNVGIQG
201: YHDTSSGRSS TDYLQPPVLH RHHNLHYPPP PPPPPMQGAR RHFHPQVVAS SYRLATISSR SPEPPQVGAE AGHRHPGPVP PTWIRIDRSH QGGVAPEATS
301: RHGNLPYLRT LPEEEVAILD LSASYQVGEV GTGLSEESIT NCLKTRTYIS STCLNLEEGA SMDQEKDSCI ICQEEYENEE KIGFLDCGHE YHADCLKKWV
401: LVKNVCPLCR APAMTPKKED V
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.