Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97629 | Canola | nucleus | 63.79 | 70.29 |
| CDY68521 | Canola | nucleus | 61.52 | 67.8 |
| Bra027282.1-P | Field mustard | nucleus | 61.93 | 67.64 |
| CDX75805 | Canola | cytosol | 59.05 | 64.79 |
| CDX82450 | Canola | nucleus | 58.02 | 62.95 |
| Bra001582.1-P | Field mustard | nucleus | 56.58 | 62.93 |
| AT1G53190.1 | Thale cress | nucleus | 54.73 | 53.85 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 36.21 | 32.71 |
| KRH55161 | Soybean | nucleus | 28.4 | 30.13 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 24.07 | 29.77 |
| KRH30071 | Soybean | cytosol | 20.99 | 29.65 |
| KRH26195 | Soybean | nucleus | 27.57 | 29.26 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 27.37 | 29.1 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 25.1 | 28.98 |
| KRH22017 | Soybean | nucleus | 29.84 | 27.46 |
| KRH55165 | Soybean | nucleus | 17.28 | 27.01 |
| Solyc12g014070.1.1 | Tomato | nucleus | 29.22 | 26.54 |
| PGSC0003DMT400039631 | Potato | nucleus | 28.81 | 26.12 |
| KRH55090 | Soybean | nucleus | 19.34 | 25.27 |
| Solyc10g007140.2.1 | Tomato | nucleus | 25.72 | 24.08 |
| PGSC0003DMT400054921 | Potato | nucleus | 25.31 | 23.7 |
| AT3G47180.1 | Thale cress | cytosol | 9.05 | 20.95 |
| AT4G00070.1 | Thale cress | nucleus | 7.61 | 20.67 |
| AT3G63530.2 | Thale cress | cytosol | 10.08 | 19.76 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.78 | 19.13 |
| Os05t0564300-01 | Rice | nucleus | 19.55 | 19.0 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.58 | 18.94 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 20.37 | 18.82 |
| Os01t0667700-02 | Rice | nucleus | 20.16 | 18.7 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.16 | 18.6 |
| AT5G52140.1 | Thale cress | nucleus | 10.7 | 18.57 |
| EES03404 | Sorghum | nucleus | 19.75 | 18.43 |
| Zm00001d011541_P004 | Maize | nucleus | 19.55 | 17.92 |
| KXG22536 | Sorghum | nucleus | 18.31 | 17.52 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 18.52 | 17.31 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 12.76 | 16.89 |
| Zm00001d009571_P002 | Maize | nucleus | 17.7 | 16.8 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 17.9 | 16.6 |
| AT1G17970.1 | Thale cress | nucleus | 12.55 | 16.58 |
| AT5G52155.1 | Thale cress | nucleus | 6.17 | 16.48 |
| AT4G31450.2 | Thale cress | nucleus | 16.67 | 16.3 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 17.7 | 15.96 |
| Solyc07g062720.1.1 | Tomato | nucleus | 25.31 | 15.87 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 17.7 | 15.69 |
| AT5G24870.2 | Thale cress | nucleus | 16.67 | 15.58 |
| AT2G37150.3 | Thale cress | endoplasmic reticulum, extracellular | 18.93 | 15.36 |
| PGSC0003DMT400032385 | Potato | nucleus | 25.51 | 15.27 |
| AT5G10650.2 | Thale cress | nucleus | 16.46 | 15.24 |
| AT5G52150.1 | Thale cress | cytosol, nucleus, peroxisome | 5.97 | 14.5 |
| Zm00001d039015_P002 | Maize | cytosol | 11.73 | 13.94 |
| AT3G19910.1 | Thale cress | nucleus | 9.47 | 13.53 |
| AT1G36950.1 | Thale cress | cytosol | 6.17 | 13.27 |
| AT4G34040.1 | Thale cress | nucleus | 17.7 | 12.91 |
| AT1G45180.3 | Thale cress | nucleus | 17.08 | 12.87 |
| AT5G42940.1 | Thale cress | nucleus | 17.28 | 12.16 |
| AT2G15530.4 | Thale cress | nucleus | 17.28 | 10.77 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:820736 | ProteinID:AEE75612.1 | ProteinID:AEE75613.1 | EMBL:AF385699 |
| ArrayExpress:AT3G15070 | EnsemblPlantsGene:AT3G15070 | RefSeq:AT3G15070 | TAIR:AT3G15070 | RefSeq:AT3G15070-TAIR-G | EnsemblPlants:AT3G15070.1 |
| TAIR:AT3G15070.1 | EMBL:AY143948 | Unigene:At.24446 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0060776 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 |
| RefSeq:NP_001189897.1 | RefSeq:NP_566498.1 | PFAM:PF13639 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | UniProt:Q94F54 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00000AC6A7 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
Coordinates
chr3:-:5070134..5073440
Molecular Weight (calculated)
54745.9 Da
IEP (calculated)
6.650
GRAVY (calculated)
-0.673
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.