Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97629 | Canola | nucleus | 87.3 | 87.3 |
| CDX75805 | Canola | cytosol | 62.59 | 62.3 |
| CDX82450 | Canola | nucleus | 62.81 | 61.83 |
| AT3G15070.1 | Thale cress | nucleus | 67.8 | 61.52 |
| CDY26006 | Canola | nucleus | 45.12 | 43.07 |
| CDY24110 | Canola | nucleus | 44.67 | 42.83 |
| CDY25871 | Canola | nucleus | 44.67 | 41.21 |
| CDY55839 | Canola | nucleus | 45.35 | 40.9 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 36.05 | 29.55 |
| KRH30071 | Soybean | cytosol | 22.68 | 29.07 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 25.85 | 27.08 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 24.04 | 26.97 |
| KRH55161 | Soybean | nucleus | 27.44 | 26.42 |
| KRH55165 | Soybean | nucleus | 18.37 | 26.05 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 26.76 | 25.82 |
| KRH26195 | Soybean | nucleus | 26.76 | 25.76 |
| CDY13429 | Canola | cytosol | 14.51 | 24.81 |
| KRH55090 | Soybean | nucleus | 20.63 | 24.46 |
| Solyc12g014070.1.1 | Tomato | nucleus | 29.48 | 24.3 |
| KRH22017 | Soybean | nucleus | 28.57 | 23.86 |
| PGSC0003DMT400039631 | Potato | nucleus | 28.57 | 23.51 |
| Solyc10g007140.2.1 | Tomato | nucleus | 27.44 | 23.31 |
| PGSC0003DMT400054921 | Potato | nucleus | 26.76 | 22.74 |
| CDX93901 | Canola | nucleus | 11.79 | 21.67 |
| CDY53710 | Canola | nucleus | 11.79 | 21.49 |
| CDX97032 | Canola | plastid | 15.42 | 20.3 |
| CDX77848 | Canola | nucleus | 9.75 | 20.28 |
| CDY67192 | Canola | nucleus | 9.75 | 20.19 |
| CDY71882 | Canola | plastid | 15.65 | 19.71 |
| CDY27083 | Canola | nucleus | 9.3 | 18.72 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 22.0 | 18.44 |
| CDX68213 | Canola | nucleus, plastid | 14.51 | 18.34 |
| CDX83878 | Canola | nucleus | 14.74 | 18.21 |
| CDX91624 | Canola | nucleus | 9.07 | 18.18 |
| CDY11092 | Canola | cytosol, plastid | 14.29 | 18.1 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 21.54 | 17.99 |
| CDX85750 | Canola | nucleus | 15.65 | 17.88 |
| CDX96741 | Canola | nucleus | 14.74 | 17.86 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 21.32 | 17.8 |
| Os01t0667700-02 | Rice | nucleus | 20.86 | 17.56 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.86 | 17.46 |
| CDY60141 | Canola | plastid | 14.06 | 17.37 |
| CDX73013 | Canola | plastid | 13.61 | 16.9 |
| EES03404 | Sorghum | nucleus | 19.95 | 16.89 |
| CDY00512 | Canola | nucleus | 10.43 | 16.85 |
| KXG22536 | Sorghum | nucleus | 19.05 | 16.54 |
| CDY31919 | Canola | nucleus | 10.2 | 16.48 |
| Os05t0564300-01 | Rice | nucleus | 18.59 | 16.4 |
| CDX79718 | Canola | nucleus | 19.73 | 16.38 |
| CDY32973 | Canola | nucleus | 15.19 | 16.34 |
| Zm00001d011541_P004 | Maize | nucleus | 19.27 | 16.04 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 18.82 | 15.96 |
| Zm00001d009571_P002 | Maize | nucleus | 18.37 | 15.82 |
| CDX95473 | Canola | nucleus | 16.55 | 15.73 |
| CDY43590 | Canola | nucleus | 14.97 | 15.68 |
| CDY63645 | Canola | nucleus | 16.33 | 15.58 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 18.14 | 15.27 |
| CDY13433 | Canola | nucleus | 16.1 | 15.24 |
| CDX78393 | Canola | nucleus | 17.01 | 15.18 |
| CDY46757 | Canola | nucleus | 18.14 | 15.01 |
| CDY55435 | Canola | nucleus | 17.91 | 14.96 |
| CDY68658 | Canola | nucleus | 15.87 | 14.93 |
| CDX91625 | Canola | cytosol | 7.71 | 14.85 |
| CDY68424 | Canola | nucleus | 17.91 | 14.71 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 17.91 | 14.66 |
| CDX70363 | Canola | nucleus | 16.1 | 14.61 |
| CDX97044 | Canola | nucleus | 16.78 | 14.51 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 17.91 | 14.42 |
| CDY25357 | Canola | nucleus | 10.43 | 14.38 |
| CDX88140 | Canola | nucleus | 15.65 | 14.32 |
| CDY24595 | Canola | nucleus | 10.2 | 14.29 |
| CDY33429 | Canola | nucleus | 10.43 | 13.94 |
| CDX69813 | Canola | mitochondrion | 16.78 | 13.88 |
| Solyc07g062720.1.1 | Tomato | nucleus | 24.26 | 13.81 |
| CDY42218 | Canola | nucleus | 10.43 | 13.77 |
| PGSC0003DMT400032385 | Potato | nucleus | 24.49 | 13.3 |
| CDY17114 | Canola | nucleus | 15.87 | 13.18 |
| CDY27082 | Canola | cytosol | 7.03 | 13.03 |
| CDY40109 | Canola | nucleus | 5.44 | 12.9 |
| CDY37230 | Canola | nucleus | 17.01 | 12.73 |
| CDY22376 | Canola | nucleus | 17.69 | 12.68 |
| CDY62314 | Canola | nucleus | 16.78 | 12.5 |
| Zm00001d039015_P002 | Maize | cytosol | 11.34 | 12.22 |
| CDY43220 | Canola | nucleus | 16.33 | 11.82 |
| CDY17061 | Canola | nucleus | 16.1 | 11.72 |
| CDX71531 | Canola | nucleus | 16.55 | 11.46 |
| CDY69560 | Canola | nucleus | 6.12 | 5.3 |
| CDY47948 | Canola | nucleus | 5.9 | 5.17 |
| CDY36635 | Canola | nucleus | 6.12 | 4.53 |
Protein Annotations
| EnsemblPlants:CDY68521 | EnsemblPlantsGene:GSBRNA2T00075372001 | Gene3D:3.30.40.10 | GO:A0A078JS99 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY68521 | ProteinID:CDY68521.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE9A10 |
| UniProt:A0A078JS99 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng59350DBnaCnng59350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS99]
Coordinates
chrLK037475:+:1144..3767
Molecular Weight (calculated)
49131.1 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.634
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTCLDMEQH SQTFGLPPPH ISVPSFEPYD NNNSMLHGLQ QSHHHQRPSN FGPAMSTPPH FHLPYAPFHA PPFAPGGTST ENERDARVMG QGYKRKSTQV
101: MPGNFQYQST AEAPFPFPHY GPQPVDERSV RNRAGAATMD PPLSHVHSNF VQGSYLAPPG SVWYDQHCNG NTSDGSSSSL WPQPPSVPYM HGHGVTGSIN
201: SGNVCFPRYH ETSSSRNQTP FVYPRHNHFS HHPAPPPTLF PHLASVSYTV PMNIHDASYS HVGPVQSTGF SINPQRPLDD FVPAATLRNH GLPRFRAFPT
301: DEVAVFREGG FYSAVDYVDH HQDMRLDIED MSYEELLALS DHIGTVKTGL SEEDVEALLK RRTSLSTRIN LEDATSTDLE TDSCTICQEN YKNQDQIATL
401: DCRHEYHAEC LKKWLVIKNI CPVCKSEALG HGKEEGTIKS L
101: MPGNFQYQST AEAPFPFPHY GPQPVDERSV RNRAGAATMD PPLSHVHSNF VQGSYLAPPG SVWYDQHCNG NTSDGSSSSL WPQPPSVPYM HGHGVTGSIN
201: SGNVCFPRYH ETSSSRNQTP FVYPRHNHFS HHPAPPPTLF PHLASVSYTV PMNIHDASYS HVGPVQSTGF SINPQRPLDD FVPAATLRNH GLPRFRAFPT
301: DEVAVFREGG FYSAVDYVDH HQDMRLDIED MSYEELLALS DHIGTVKTGL SEEDVEALLK RRTSLSTRIN LEDATSTDLE TDSCTICQEN YKNQDQIATL
401: DCRHEYHAEC LKKWLVIKNI CPVCKSEALG HGKEEGTIKS L
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.