Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006070.1-P | Field mustard | nucleus | 88.27 | 86.67 |
| CDX78393 | Canola | nucleus | 87.86 | 86.44 |
| CDX97032 | Canola | plastid | 56.38 | 81.79 |
| CDY71882 | Canola | plastid | 58.02 | 80.57 |
| CDX95473 | Canola | nucleus | 73.66 | 77.16 |
| CDX97044 | Canola | nucleus | 76.34 | 72.75 |
| CDX85750 | Canola | nucleus | 56.58 | 71.24 |
| CDX69813 | Canola | mitochondrion | 76.54 | 69.79 |
| AT5G10650.2 | Thale cress | nucleus | 73.87 | 68.38 |
| CDY40109 | Canola | nucleus | 22.22 | 58.06 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 10.29 | 54.35 |
| CDX88140 | Canola | nucleus | 52.26 | 52.7 |
| CDY68658 | Canola | nucleus | 50.82 | 52.67 |
| Zm00001d019616_P001 | Maize | cytosol | 12.96 | 48.84 |
| Zm00001d015453_P001 | Maize | cytosol | 12.96 | 48.84 |
| Zm00001d013776_P001 | Maize | cytosol | 12.96 | 48.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.16 | 43.56 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 45.47 | 40.18 |
| KRH04957 | Soybean | nucleus | 42.18 | 38.53 |
| KRH52597 | Soybean | nucleus | 42.8 | 38.45 |
| PGSC0003DMT400067670 | Potato | nucleus | 40.53 | 37.31 |
| KRH16134 | Soybean | nucleus | 41.56 | 36.4 |
| Solyc08g006460.2.1 | Tomato | nucleus | 39.3 | 35.97 |
| Solyc12g096420.1.1 | Tomato | nucleus | 40.33 | 35.57 |
| PGSC0003DMT400075959 | Potato | nucleus | 39.3 | 35.05 |
| CDY13429 | Canola | cytosol | 18.11 | 34.11 |
| KRH61936 | Soybean | nucleus | 38.07 | 33.21 |
| Os06t0695600-01 | Rice | nucleus | 33.74 | 28.32 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 29.84 | 28.21 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 32.72 | 27.51 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 31.69 | 27.3 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 32.92 | 27.3 |
| KXG20741 | Sorghum | nucleus | 33.13 | 27.29 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 32.1 | 27.23 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 32.51 | 27.1 |
| EES12797 | Sorghum | nucleus | 20.58 | 26.74 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 20.16 | 26.56 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 20.37 | 26.54 |
| Zm00001d014609_P002 | Maize | nucleus | 31.89 | 26.5 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 20.37 | 26.4 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 32.3 | 26.04 |
| Os08t0241400-00 | Rice | nucleus | 20.16 | 25.99 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 19.75 | 25.81 |
| Zm00001d024406_P002 | Maize | nucleus | 18.93 | 25.7 |
| Zm00001d015289_P001 | Maize | nucleus | 29.42 | 25.27 |
| Os02t0150700-01 | Rice | extracellular | 32.92 | 24.96 |
| OQU80147 | Sorghum | nucleus | 18.31 | 24.86 |
| Zm00001d026248_P001 | Maize | nucleus | 18.93 | 24.21 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 19.75 | 24.18 |
| EES04530 | Sorghum | nucleus | 25.51 | 23.94 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 28.4 | 23.75 |
| CDY63645 | Canola | nucleus | 21.19 | 22.29 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 31.69 | 22.16 |
| CDX73013 | Canola | plastid | 16.05 | 21.97 |
| CDY13433 | Canola | nucleus | 20.99 | 21.89 |
| Os04t0603200-01 | Rice | nucleus | 14.81 | 21.88 |
| CDY60141 | Canola | plastid | 16.05 | 21.85 |
| CDX68213 | Canola | nucleus, plastid | 15.43 | 21.49 |
| CDX83878 | Canola | nucleus | 15.64 | 21.29 |
| CDY11092 | Canola | cytosol, plastid | 15.23 | 21.26 |
| CDX96741 | Canola | nucleus | 15.64 | 20.88 |
| CDX77848 | Canola | nucleus | 8.64 | 19.81 |
| CDY67192 | Canola | nucleus | 8.64 | 19.72 |
| CDX93901 | Canola | nucleus | 9.67 | 19.58 |
| CDY53710 | Canola | nucleus | 9.67 | 19.42 |
| CDY27083 | Canola | nucleus | 8.02 | 17.81 |
| CDX91624 | Canola | nucleus | 8.02 | 17.73 |
| CDY00512 | Canola | nucleus | 9.88 | 17.58 |
| CDY31919 | Canola | nucleus | 9.88 | 17.58 |
| CDY43590 | Canola | nucleus | 15.02 | 17.34 |
| CDY26006 | Canola | nucleus | 16.26 | 17.1 |
| CDY32973 | Canola | nucleus | 14.4 | 17.07 |
| CDY24110 | Canola | nucleus | 15.84 | 16.74 |
| CDX75805 | Canola | cytosol | 15.02 | 16.48 |
| CDY37230 | Canola | nucleus | 19.96 | 16.47 |
| CDX97629 | Canola | nucleus | 14.81 | 16.33 |
| CDY68521 | Canola | nucleus | 14.61 | 16.1 |
| CDX82450 | Canola | nucleus | 14.81 | 16.07 |
| CDY62314 | Canola | nucleus | 19.55 | 16.05 |
| CDY25871 | Canola | nucleus | 15.02 | 15.27 |
| CDY55839 | Canola | nucleus | 15.23 | 15.13 |
| CDY24595 | Canola | nucleus | 9.67 | 14.92 |
| CDY17114 | Canola | nucleus | 16.26 | 14.88 |
| CDY46757 | Canola | nucleus | 15.84 | 14.45 |
| CDY25357 | Canola | nucleus | 9.47 | 14.38 |
| CDX79718 | Canola | nucleus | 15.64 | 14.31 |
| CDY33429 | Canola | nucleus | 9.67 | 14.24 |
| CDY42218 | Canola | nucleus | 9.67 | 14.07 |
| CDX91625 | Canola | cytosol | 6.58 | 13.97 |
| CDY55435 | Canola | nucleus | 15.02 | 13.83 |
| CDY68424 | Canola | nucleus | 15.02 | 13.59 |
| CDY17061 | Canola | nucleus | 16.87 | 13.53 |
| CDY22376 | Canola | nucleus | 17.08 | 13.5 |
| CDY43220 | Canola | nucleus | 16.67 | 13.3 |
| CDX71531 | Canola | nucleus | 17.28 | 13.19 |
| CDY27082 | Canola | cytosol | 6.38 | 13.03 |
| CDY47948 | Canola | nucleus | 7.2 | 6.96 |
| CDY69560 | Canola | nucleus | 6.79 | 6.48 |
| CDY36635 | Canola | nucleus | 6.79 | 5.54 |
Protein Annotations
| EnsemblPlants:CDX70363 | EnsemblPlantsGene:GSBRNA2T00140145001 | Gene3D:3.30.40.10 | GO:A0A078C5T2 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX70363 | ProteinID:CDX70363.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDF98C |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g04470D
Coordinates
chrLK031791:-:37288..39772
Molecular Weight (calculated)
52780.8 Da
IEP (calculated)
9.844
GRAVY (calculated)
-0.706
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRCAGKRLV DGMVVQGKAS GPVLREYMKK KKDEKITPRI GFTDNNRKVG RPPVCSSSNG KEKIAGSSSR TPGGFGYLRK PAKGTGRRQP SSNLDTDSVH
101: DDSAAAEPTL PRLKTKRSIQ SQNTFSGGVV MTKAGSSSRG TSTSSHQTSD LDTRVGPSVS SSSGSDRTVR GGLSRNGFRN LRCNSIMSNV LPTSSSSATK
201: ISVSKTKNSD GESSSSSKGN KSSVSVLKGM NQSSSRGNGI TLSDRRRNRV VPTIRDNGVV SSSRSGRRGA VASLATFRQT PHPATPTNSS SSRTFTPSNS
301: YSRTSSSTGR LGRMMPGSPS LVNRDGLSRY NMNGIAEILL ALDRIEHDQE LTYEQLASLE TNLFLSDMIR FYDQHSDMRL DIDNMSYEEL LALGDEMGTV
401: STALSEEALS RSLKKNIYQE TDETGAISLN KDDDIKCSIC QEEYVDGDEV GTMACEHMYH VSCVQQWLRM KNWCPICKTS AEEKPF
101: DDSAAAEPTL PRLKTKRSIQ SQNTFSGGVV MTKAGSSSRG TSTSSHQTSD LDTRVGPSVS SSSGSDRTVR GGLSRNGFRN LRCNSIMSNV LPTSSSSATK
201: ISVSKTKNSD GESSSSSKGN KSSVSVLKGM NQSSSRGNGI TLSDRRRNRV VPTIRDNGVV SSSRSGRRGA VASLATFRQT PHPATPTNSS SSRTFTPSNS
301: YSRTSSSTGR LGRMMPGSPS LVNRDGLSRY NMNGIAEILL ALDRIEHDQE LTYEQLASLE TNLFLSDMIR FYDQHSDMRL DIDNMSYEEL LALGDEMGTV
401: STALSEEALS RSLKKNIYQE TDETGAISLN KDDDIKCSIC QEEYVDGDEV GTMACEHMYH VSCVQQWLRM KNWCPICKTS AEEKPF
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.