Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G328500.1 | Wheat | nucleus | 90.19 | 90.66 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 86.4 | 87.61 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 83.99 | 83.28 |
| Os06t0695600-01 | Rice | nucleus | 61.79 | 62.0 |
| KXG20741 | Sorghum | nucleus | 54.56 | 53.73 |
| Zm00001d014609_P002 | Maize | nucleus | 52.5 | 52.14 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 45.96 | 45.8 |
| GSMUA_Achr3P05160_001 | Banana | nucleus | 35.11 | 34.63 |
| CDX97032 | Canola | plastid | 19.97 | 34.63 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 32.01 | 33.82 |
| CDY71882 | Canola | plastid | 20.31 | 33.71 |
| CDX85750 | Canola | nucleus | 22.2 | 33.42 |
| KRH04957 | Soybean | nucleus | 28.74 | 31.39 |
| KRH52597 | Soybean | nucleus | 28.06 | 30.13 |
| CDX88140 | Canola | nucleus | 24.96 | 30.08 |
| GSMUA_Achr6P03840_001 | Banana | nucleus | 19.11 | 29.92 |
| PGSC0003DMT400067670 | Potato | nucleus | 27.02 | 29.73 |
| Solyc08g006460.2.1 | Tomato | nucleus | 27.02 | 29.57 |
| Solyc12g096420.1.1 | Tomato | nucleus | 27.71 | 29.22 |
| CDY68658 | Canola | nucleus | 23.58 | 29.21 |
| KRH16134 | Soybean | nucleus | 27.88 | 29.19 |
| CDX78393 | Canola | nucleus | 24.61 | 28.95 |
| Bra006070.1-P | Field mustard | nucleus | 24.61 | 28.89 |
| AT5G24870.2 | Thale cress | nucleus | 25.82 | 28.85 |
| CDX95473 | Canola | nucleus | 22.89 | 28.66 |
| CDX70363 | Canola | nucleus | 23.75 | 28.4 |
| KRH61936 | Soybean | nucleus | 27.02 | 28.19 |
| CDX97044 | Canola | nucleus | 24.61 | 28.04 |
| PGSC0003DMT400075959 | Potato | nucleus | 25.47 | 27.16 |
| AT5G10650.2 | Thale cress | nucleus | 24.44 | 27.05 |
| CDY40109 | Canola | nucleus | 8.43 | 26.34 |
| GSMUA_Achr10P... | Banana | nucleus | 22.72 | 26.09 |
| CDX69813 | Canola | mitochondrion | 23.75 | 25.89 |
| Bra009015.1-P | Field mustard | plastid | 23.58 | 25.7 |
| CDY13429 | Canola | cytosol | 10.15 | 22.87 |
| Bra009800.1-P | Field mustard | nucleus | 15.66 | 22.2 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 13.6 | 21.41 |
| GSMUA_Achr7P15850_001 | Banana | nucleus | 23.06 | 20.62 |
| Bra024009.1-P | Field mustard | nucleus | 6.2 | 20.57 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 10.84 | 18.26 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 9.98 | 16.62 |
| TraesCS5A01G312800.1 | Wheat | cytosol, nucleus, plastid | 4.65 | 15.79 |
| CDY63645 | Canola | nucleus | 12.22 | 15.37 |
| Bra024007.1-P | Field mustard | nucleus | 12.22 | 15.2 |
| TraesCS7A01G054700.2 | Wheat | nucleus | 6.54 | 15.08 |
| CDY13433 | Canola | nucleus | 12.05 | 15.02 |
| TraesCS4A01G441400.1 | Wheat | nucleus | 6.37 | 14.8 |
| AT4G31450.2 | Thale cress | nucleus | 12.56 | 14.69 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 7.06 | 14.24 |
| TraesCS4A01G112900.1 | Wheat | nucleus | 6.02 | 14.0 |
| TraesCS2A01G022100.1 | Wheat | nucleus | 15.83 | 13.12 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 11.88 | 13.09 |
| TraesCS2A01G400200.1 | Wheat | nucleus | 5.68 | 13.04 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 11.36 | 12.72 |
| TraesCS1A01G107600.1 | Wheat | nucleus | 11.7 | 12.66 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 7.92 | 12.43 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 10.84 | 11.69 |
| TraesCS2A01G514400.3 | Wheat | nucleus | 13.25 | 11.51 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G428300.2 | EnsemblPlantsGene:TraesCS7A01G428300 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF99 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:621583252..621585435
Molecular Weight (calculated)
64434.4 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.771
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENAGRSST TIGILRKGSG VSLRNQSNEE RPNQFQNKPG NTTKLNPTKA TWAGNKEKPG YLRDSFNSSG SKSVSASSSK APVRKNYDEK LRRPLSAQFN
101: NAESSNRRTV VNRLQSSKKA IADEEDGHPC AQQIESEDSS STSTTGDQPT GLDPEVLDSS VSSGSSSHVV DSVARNTALR TKPRRQKDKE EIGLGKTQTA
201: STSVHQPAGP RNLAIGVKSS NGAGPGVQRR GIKNLGCTSI SDVLPSGCSS SNSVHSKRTE ITRKRISDGE TSSRPRALSG QPSLYPGSTG PRVRDSEQSA
301: SQQTTRTSNR IIRDSADSVR TRRPFTQQAR MRMPDETEQG VFALRETVSG ARQPDWARFS MNEVPPQRST RPFPMELPHA IYSSSRQGSS NRTSRSRGSS
401: RPEDSSPQMF RDVHRRMNMD GIAEVLLALE RIEQHDELSY EQLLVMETNL FLSGLGLNDQ HRDMRMDIDD MSYEELLQLE DRIGSVSTAL SEEQLEKCLS
501: RVVYKRANPA LEVNKPVVDD VKCSICQVFP SSWAIITASF ARNLLFVHYY TVISFLCCLH MFLTLTGYYR RSTLRTKRLV E
101: NAESSNRRTV VNRLQSSKKA IADEEDGHPC AQQIESEDSS STSTTGDQPT GLDPEVLDSS VSSGSSSHVV DSVARNTALR TKPRRQKDKE EIGLGKTQTA
201: STSVHQPAGP RNLAIGVKSS NGAGPGVQRR GIKNLGCTSI SDVLPSGCSS SNSVHSKRTE ITRKRISDGE TSSRPRALSG QPSLYPGSTG PRVRDSEQSA
301: SQQTTRTSNR IIRDSADSVR TRRPFTQQAR MRMPDETEQG VFALRETVSG ARQPDWARFS MNEVPPQRST RPFPMELPHA IYSSSRQGSS NRTSRSRGSS
401: RPEDSSPQMF RDVHRRMNMD GIAEVLLALE RIEQHDELSY EQLLVMETNL FLSGLGLNDQ HRDMRMDIDD MSYEELLQLE DRIGSVSTAL SEEQLEKCLS
501: RVVYKRANPA LEVNKPVVDD VKCSICQVFP SSWAIITASF ARNLLFVHYY TVISFLCCLH MFLTLTGYYR RSTLRTKRLV E
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQV FLKIYLHPNL YPKLEIIHCF
501: V
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQV FLKIYLHPNL YPKLEIIHCF
501: V
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.