Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61936 | Soybean | nucleus | 85.58 | 83.12 |
| KRH04957 | Soybean | nucleus | 65.43 | 66.54 |
| KRH16134 | Soybean | nucleus | 65.25 | 63.6 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 56.38 | 55.45 |
| Zm00001d019616_P001 | Maize | cytosol | 13.12 | 55.04 |
| Zm00001d015453_P001 | Maize | cytosol | 12.94 | 54.26 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 9.06 | 53.26 |
| Zm00001d013776_P001 | Maize | cytosol | 12.57 | 52.71 |
| KRH05664 | Soybean | nucleus | 11.28 | 50.41 |
| CDX85750 | Canola | nucleus | 33.46 | 46.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.22 | 46.22 |
| CDX78393 | Canola | nucleus | 41.77 | 45.75 |
| CDY40109 | Canola | nucleus | 15.71 | 45.7 |
| Bra006070.1-P | Field mustard | nucleus | 41.59 | 45.45 |
| CDX97032 | Canola | plastid | 27.91 | 45.07 |
| Solyc08g006460.2.1 | Tomato | nucleus | 44.18 | 45.01 |
| PGSC0003DMT400067670 | Potato | nucleus | 43.44 | 44.51 |
| CDY71882 | Canola | plastid | 28.65 | 44.29 |
| AT5G24870.2 | Thale cress | nucleus | 42.33 | 44.04 |
| Solyc12g096420.1.1 | Tomato | nucleus | 44.55 | 43.74 |
| CDY68658 | Canola | nucleus | 37.34 | 43.07 |
| CDX97044 | Canola | nucleus | 40.48 | 42.94 |
| CDX70363 | Canola | nucleus | 38.45 | 42.8 |
| CDX88140 | Canola | nucleus | 38.08 | 42.74 |
| CDX95473 | Canola | nucleus | 36.6 | 42.67 |
| PGSC0003DMT400075959 | Potato | nucleus | 42.33 | 42.02 |
| Bra009015.1-P | Field mustard | plastid | 41.22 | 41.84 |
| AT5G10650.2 | Thale cress | nucleus | 39.74 | 40.95 |
| CDX69813 | Canola | mitochondrion | 40.3 | 40.9 |
| Bra009800.1-P | Field mustard | nucleus | 28.28 | 37.32 |
| Bra024009.1-P | Field mustard | nucleus | 11.83 | 36.57 |
| CDY13429 | Canola | cytosol | 15.53 | 32.56 |
| Os06t0695600-01 | Rice | nucleus | 34.2 | 31.95 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 30.31 | 31.91 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 33.83 | 31.66 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 32.9 | 31.56 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 33.09 | 31.24 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 33.46 | 31.05 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 33.46 | 30.89 |
| Zm00001d015289_P001 | Maize | nucleus | 31.61 | 30.21 |
| Zm00001d014609_P002 | Maize | nucleus | 32.35 | 29.91 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 32.9 | 29.52 |
| KXG20741 | Sorghum | nucleus | 31.98 | 29.32 |
| EES04530 | Sorghum | nucleus | 27.91 | 29.15 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 30.13 | 28.06 |
| KRH53246 | Soybean | nucleus | 9.43 | 27.87 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 18.3 | 26.83 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 18.48 | 26.81 |
| Os02t0150700-01 | Rice | extracellular | 31.42 | 26.52 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 34.01 | 26.47 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 18.3 | 26.4 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 18.11 | 26.34 |
| KRH48568 | Soybean | nucleus | 17.19 | 26.27 |
| KRH64669 | Soybean | nucleus | 9.8 | 26.24 |
| Zm00001d024406_P002 | Maize | nucleus | 17.19 | 25.98 |
| OQU80147 | Sorghum | nucleus | 17.19 | 25.98 |
| KRH39137 | Soybean | nucleus | 17.56 | 25.75 |
| EES12797 | Sorghum | nucleus | 17.74 | 25.67 |
| KRH41763 | Soybean | nucleus | 17.56 | 25.2 |
| Os08t0241400-00 | Rice | nucleus | 17.19 | 24.67 |
| Os04t0603200-01 | Rice | nucleus | 13.86 | 22.8 |
| Zm00001d026248_P001 | Maize | nucleus | 15.9 | 22.63 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 16.45 | 22.42 |
| KRH60461 | Soybean | nucleus | 17.56 | 22.04 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 9.8 | 21.46 |
| Bra024007.1-P | Field mustard | nucleus | 18.11 | 20.98 |
| KRH29702 | Soybean | nucleus | 9.61 | 20.97 |
| KRH17980 | Soybean | nucleus | 7.76 | 20.69 |
| KRH20832 | Soybean | nucleus | 9.43 | 20.65 |
| CDY13433 | Canola | nucleus | 17.74 | 20.6 |
| KRH24699 | Soybean | nucleus | 9.43 | 20.56 |
| CDY63645 | Canola | nucleus | 17.56 | 20.56 |
| KRH16389 | Soybean | nucleus | 7.58 | 20.0 |
| AT4G31450.2 | Thale cress | nucleus | 18.11 | 19.72 |
| KRH61306 | Soybean | nucleus | 23.48 | 19.42 |
| KRH52013 | Soybean | nucleus | 23.84 | 18.22 |
| KRH61311 | Soybean | nucleus | 24.21 | 17.85 |
| KRH30071 | Soybean | cytosol | 11.28 | 17.73 |
| KRG95955 | Soybean | nucleus | 17.38 | 17.12 |
| KRH67668 | Soybean | nucleus | 17.38 | 17.06 |
| KRH26195 | Soybean | nucleus | 14.42 | 17.03 |
| KRH19845 | Soybean | nucleus | 17.19 | 16.91 |
| KRH55165 | Soybean | nucleus | 9.61 | 16.72 |
| KRH32434 | Soybean | nucleus | 16.64 | 16.7 |
| KRH55161 | Soybean | nucleus | 13.86 | 16.38 |
| KRH22017 | Soybean | nucleus | 15.53 | 15.91 |
| KRH04592 | Soybean | nucleus | 9.8 | 15.87 |
| KRH50319 | Soybean | nucleus | 20.89 | 15.8 |
| KRH04591 | Soybean | nucleus | 9.8 | 15.73 |
| KRG90628 | Soybean | nucleus | 9.61 | 15.52 |
| KRH70661 | Soybean | mitochondrion, nucleus | 20.7 | 15.36 |
| KRH55090 | Soybean | nucleus | 10.35 | 15.05 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 9.24 | 14.08 |
| KRH05663 | Soybean | cytosol | 12.2 | 11.36 |
Protein Annotations
| EMBL:ACUP02003423 | EnsemblPlants:KRH52597 | EnsemblPlantsGene:GLYMA_06G076600 | EntrezGene:100819874 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 |
| PFAM:PF13639 | PFscan:PS50089 | ProteinID:KRH52597 | ProteinID:KRH52597.1 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI000233A5D2 | UniProt:I1K941 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:5922570..5926982
Molecular Weight (calculated)
58597.6 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.706
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGYSGKRAI DGVVVPRKGM GLAFRDTANA RDRNGQVCSR ITCSSRVNTP KGTQIGSCEK GKSLKPSIQS SSAGKEAIGS SSRTCSKTSS PGKPPVKPRK
101: SPSSQLETDS SETSSVQDDS EASKLTSPPQ KSQTGGQAEL ENTVSGNVMM EVGSSSIVSN TRSRRNFHPN SGLRGQEIKS SGSVTRAGTS RYGLRNLKCN
201: TISDVIPAGC SPSDSTLNRR KDVIKKRNCE GEGSSTTRGK KMSGSSLEAR NSGPRNGISI SDTRISRNTP HRDRSDSNMA PVRTRKLISG HTRGRLSSQG
301: NANPVPPNES LVMIPSLPRS GGLNIPGVSR HTSVDSPLSC PSSHSRPGTG NEELYGVMPV SPSEYGLTHS LMNLDSFRRR YNIDSIAEVL VALERIEQDV
401: ELTHEQIRLL ESNLFLTGLN LYDPHRDMRL DIDNMSYEQL LALEERMGTV STALTEETLS ECLKKSVYQS SPSDNEAESC NEPKDDTKCS ICQEEYVAAE
501: EVGSLQCEHM YHVACIQQWL QLKNWCPICK ASVAQSNSSP S
101: SPSSQLETDS SETSSVQDDS EASKLTSPPQ KSQTGGQAEL ENTVSGNVMM EVGSSSIVSN TRSRRNFHPN SGLRGQEIKS SGSVTRAGTS RYGLRNLKCN
201: TISDVIPAGC SPSDSTLNRR KDVIKKRNCE GEGSSTTRGK KMSGSSLEAR NSGPRNGISI SDTRISRNTP HRDRSDSNMA PVRTRKLISG HTRGRLSSQG
301: NANPVPPNES LVMIPSLPRS GGLNIPGVSR HTSVDSPLSC PSSHSRPGTG NEELYGVMPV SPSEYGLTHS LMNLDSFRRR YNIDSIAEVL VALERIEQDV
401: ELTHEQIRLL ESNLFLTGLN LYDPHRDMRL DIDNMSYEQL LALEERMGTV STALTEETLS ECLKKSVYQS SPSDNEAESC NEPKDDTKCS ICQEEYVAAE
501: EVGSLQCEHM YHVACIQQWL QLKNWCPICK ASVAQSNSSP S
001: MDGFKGKRTS RPIMPRKASG LVLHENMKKK DDKSVVPICS RIGCSSRVSS TKGDLIDHKA KATVSSFRSP LSGKETVGSS SRSMSGFGGT KKASKVIGRR
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
Arabidopsis Description
At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.